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Series GSE172433 Query DataSets for GSE172433
Status Public on Sep 08, 2022
Title Genome-wide H3k27ac levels following FOXA1 KO in UMUC-1 human bladder cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 36323682
Submission date Apr 20, 2021
Last update date Nov 17, 2022
Contact name WENHUO HU
E-mail(s) huwenhuo@gmail.com, huw@mskcc.org
Phone 6468882468
Organization name MEMORIAL SLOAN KETTERING CANCER CENTER
Department HOPP
Lab Christopher Park
Street address 1275 YORK AVENUE
City NEW YORK
State/province NEW YORK
ZIP/Postal code 10065
Country USA
 
Platforms (2)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (12)
GSM5255986 ChIPSEQ_Ctrl_H3K27Ac_rep1
GSM5255987 ChIPSEQ_Ctrl_H3K27Ac_rep2
GSM5255988 ChIPSEQ_FOXA1KO_H3K27Ac_rep1
This SuperSeries is composed of the following SubSeries:
GSE172431 Genome-wide H3k27ac levels following FOXA1 KO in UMUC-1 human bladder cancer cells [ChIP-seq]
GSE172432 Genome-wide H3k27ac levels following FOXA1 KO in UMUC-1 human bladder cancer cells [RNA-seq]
GSE176249 Genome-wide H3k27ac levels following FOXA1 KO in UMUC-1 human bladder cancer cells [scRNA-Seq]
Relations
BioProject PRJNA723297

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE172433_RAW.tar 42.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp

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