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Series GSE17283 Query DataSets for GSE17283
Status Public on Jul 29, 2009
Title Kc167 MCM Localization
Project modENCODE
Organism Drosophila melanogaster
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary modENCODE_submission_675
This submission comes from a modENCODE project of David MacAlpine. For full list of modENCODE projects, see http://www.genome.gov/26524648
Project Goal: We will precisely identify sequence elements that direct DNA replication by using chromatin immunoprecipitation of known replication initiation complexes. These experiments will be conducted in multiple cell types and developmental tissues.

Keywords: CHIP-chip

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
 
Overall design EXPERIMENT TYPE: CHIP-chip. BIOLOGICAL SOURCE: Cell Line: Kc167; Tissue: embryo-derived cell-line; Genotype: se/e; Sex: Female NUMBER OF REPLICATES: 2; EXPERIMENTAL FACTORS: Antibody Pan MCM2-7 Antibody
Web link http://www.ncbi.nlm.nih.gov/projects/geo/info/ENCODE.html
 
Contributor(s) MacAlpine D, MacAlpine H
Citation missing Has this study been published? Please login to update or notify GEO.
BioProject PRJNA63463
Submission date Jul 23, 2009
Last update date Jun 28, 2012
Contact name DCC modENCODE
E-mail(s) help@modencode.org
Phone 416-673-8579
Organization name Ontario Institute for Cancer Research
Lab modENCODE DCC
Street address MaRS Centre, South Tower, 101 College Street, Suite 800
City Toronto
State/province Ontario
ZIP/Postal code M5G 0A3
Country Canada
 
Platforms (4)
GPL8141 Agilent_Dm_4.3_112_tiling_a
GPL8142 Agilent_Dm_4.3_112_tiling_b
GPL8235 Agilent_Dm_4.3_112_tiling_c
Samples (8)
GSM432712 kc_mcm_1 extraction1_array1
GSM432713 kc_mcm_1 extraction1_array2
GSM432714 kc_mcm_1 extraction1_array3

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17283_MA2C_mcm_pair_exp_1_normalized.txt.gz 7.1 Mb (ftp)(http) TXT
GSE17283_MA2C_mcm_pair_exp_2_normalized.txt.gz 7.1 Mb (ftp)(http) TXT
GSE17283_RAW.tar 548.9 Mb (http)(custom) TAR (of TXT)
GSE17283_mcm_meta_MA2Cscore.wig.gz 5.6 Mb (ftp)(http) WIG
GSE17283_mcm_meta_peaks.gff.gz 57.1 Kb (ftp)(http) GFF
GSE17283_mcm_pair_exp1_532.txt.gz 11.3 Mb (ftp)(http) TXT
GSE17283_mcm_pair_exp1_635.txt.gz 11.3 Mb (ftp)(http) TXT
GSE17283_mcm_pair_exp2_532.txt.gz 11.3 Mb (ftp)(http) TXT
GSE17283_mcm_pair_exp2_635.txt.gz 11.3 Mb (ftp)(http) TXT
GSE17283_meta.ndf.gz 32.6 Mb (ftp)(http) NDF
GSE17283_meta.pos.gz 13.9 Mb (ftp)(http) POS
Processed data are available on Series record

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