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Series GSE173656 Query DataSets for GSE173656
Status Public on Oct 11, 2022
Title mRNA-seq time series of Caenorhabditis elegans L1 starvation
Organism Caenorhabditis elegans
Experiment type Expression profiling by high throughput sequencing
Summary Whole starved L1 larvae were collected at twelve time points spanning from hatching to death.
 
Overall design Four biological replicates were collected for each of 12 time points (-2, 0, 2, 4, 6, 9, 12, 24, 48, 96, 192, 288 hours) throughout L1 starvation.
 
Contributor(s) Webster AK, Chitrakar R, Baugh LR
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 30, 2021
Last update date Oct 13, 2022
Contact name Amy K Webster
E-mail(s) awebst10@uoregon.edu
Organization name University of Oregon
Street address Institute of Ecology and Evolution
City Eugene
State/province Oregon
ZIP/Postal code 97703
Country USA
 
Platforms (1)
GPL22765 Illumina HiSeq 4000 (Caenorhabditis elegans)
Samples (48)
GSM5273155 0 hr rep 1
GSM5273156 0 hr rep 5
GSM5273157 0 hr rep 6
This SubSeries is part of SuperSeries:
GSE173657 Alternative somatic and germline gene-regulatory strategies during starvation-induced developmental arrest
Relations
BioProject PRJNA726550
SRA SRP318026

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE173656_RAW.tar 6.6 Mb (http)(custom) TAR (of TXT)
GSE173656_TimeSeries_RNAseq_output.xlsx 27.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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