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Series GSE175681 Query DataSets for GSE175681
Status Public on May 28, 2021
Title The transcriptome and genome-wide mapping of Hif1α binding sites in kidney tubule cells
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary To understand the transcription regulation of HIF1α in kidney tubule cells, we stabilized HIF1α with 50μM FG-4592 in HK2 cells. We captured ChIPseq of HIF1α and constructed transcription profile under FG-4592.
Overall design Kidney tubule cell culture HK2 were subjected to ChIP-seq, RNA-seq.
Contributor(s) Wenju L, Aiping D, Jingping Y
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Submission date May 27, 2021
Last update date May 30, 2021
Contact name Aiping Duan
Organization name Jinling hospital
Street address zhongshan east road 305
City nanjing
ZIP/Postal code 210000
Country China
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (4)
GSM5343809 HIF1α _ChIPSeq_rep1
GSM5343810 HIF1α _ChIPSeq_rep2
GSM5343811 RNAseq rep1
BioProject PRJNA733188
SRA SRP321657

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Supplementary file Size Download File type/resource
GSE175681_RAW.tar 723.9 Mb (http)(custom) TAR (of BED, BW, GTF)
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Raw data are available in SRA
Processed data provided as supplementary file

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