|
| Status |
Public on Nov 05, 2010 |
| Title |
An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer: gene expression |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
Third-party reanalysis
|
| Summary |
10 Breast cancer cell lines profiled on the Affymetrix U133 Plus 2.0 platform used in conjunction with matched DNA copy number and DNA methylation data for integrative analysis.
|
| |
|
| Overall design |
In total, 10 samples were used. The MCF10A profile used as normal was obtained from GSM254525 and the remaining 2 cell lines were obtained from caBIG. Full RMA normalized expression profile is attached.
|
| |
|
| Contributor(s) |
Chari R |
| Citation(s) |
20478067 |
| |
| Submission date |
Aug 23, 2009 |
| Last update date |
Mar 25, 2019 |
| Contact name |
Raj Chari |
| E-mail(s) |
rchari@bccrc.ca
|
| Organization name |
BC Cancer Research Centre
|
| Department |
Cancer Genetics and Developmental Biology
|
| Lab |
Wan Lam Lab
|
| Street address |
675 West 10th Avenue
|
| City |
Vancouver |
| State/province |
BC |
| ZIP/Postal code |
V5Z 1L3 |
| Country |
Canada |
| |
|
| Platforms (1) |
| GPL570 |
[HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array |
|
| Samples (10)
|
|
| This SubSeries is part of SuperSeries: |
| GSE21541 |
An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer |
|
| Relations |
| Reanalysis of |
GSM254525 |
| BioProject |
PRJNA129037 |
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