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Series GSE179204 Query DataSets for GSE179204
Status Public on Mar 31, 2022
Title A Novel platform for single-cell RNA-sequencing and its application in genome medicine [icell8]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary we describe the utility of this novel platform in the field of genome medicine using a full-length approach to evaluate the relationship between transcriptional and mutational heterogeneity on single cells in dermal fibroblasts derived from patients with Hutchinson-Gilford progeria syndrome (HGPS)
 
Overall design scRNA Seq ICELL8 full length approach
Additional information in icell8_demultiplexed.txt
 
Contributor(s) Sitte M, Shomroni O, Salinas G
Citation(s) 35260714
Submission date Jun 30, 2021
Last update date Jun 30, 2022
Contact name Gabriela Salinas
E-mail(s) Gabriela.Salinas-Riester@medizin.uni-goettingen.de
Organization name Universitaetsmedizin Goettingen
Department Department of Pathology
Lab NGS Integrative Genomics
Street address Kreuzbergring 57
City Goettingen
State/province Lower-Saxony
ZIP/Postal code 37075
Country Germany
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (3)
GSM5411464 ICELL8_CHIP1
GSM5411465 ICELL8_CHIP2
GSM5411466 ICELL8_CHIP3
This SubSeries is part of SuperSeries:
GSE179211 A Novel platform for single-cell RNA-sequencing and its application in genome medicine
Relations
BioProject PRJNA742698
SRA SRP326319

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179204_RAW.tar 30.4 Mb (http)(custom) TAR (of CSV)
GSE179204_gene_info.csv.gz 1006.7 Kb (ftp)(http) CSV
GSE179204_icell8-demultiplexed.txt.gz 504 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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