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Series GSE179314 Query DataSets for GSE179314
Status Public on Jul 01, 2024
Title Identification of differential expressed genes after SP1 or SP3 knockdown in colorectal cancer cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary SP1 and SP3 have been reported to play an critical role in the pregression of tumors. In order to elucidate the molecular mechanism of SP1 and SP3 in colorectal cancer, RNA-seq analysis was performed on SP1 and SP3 knockdown and control HCT116 cells.
 
Overall design HCT116 cells with SP1 or SP3 knockdown were generated by siRNAs.
 
Contributor(s) Zhu Z, Guo Y, Cui L, Liu C
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 02, 2021
Last update date Jul 01, 2024
Contact name Zhehui Zhu
E-mail(s) zhehuizhu0307@126.com
Phone 18217789586
Organization name Shanghai Jiao Tong University School of Medicine
Street address Kongjiang Road 1665, Shanghai
City Shanghai
State/province Shanghai
ZIP/Postal code 200092
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (5)
GSM5414197 116_NC_1
GSM5414198 116_NC_2
GSM5414199 116_siSP1
Relations
BioProject PRJNA743222
SRA SRP326629

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE179314_RAW.tar 770.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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