GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE180495 Query DataSets for GSE180495
Status Public on Jan 17, 2022
Title Gibbin (AHDC1) regulates the mesoderm to pattern epithelial development
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by genome tiling array
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 35585237
Submission date Jul 20, 2021
Last update date May 21, 2022
Contact name Anthony Oro
Organization name Stanford University
Department Dermatology
Street address 269 Campus Drvie
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
Platforms (4)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL21145 Infinium MethylationEPIC
Samples (64)
GSM4986867 ATACseq_d7_AHDC1_KO_r1
GSM4986868 ATACseq_d7_AHDC1_KO_r2
GSM4986869 ATACseq_d7_GATA3_KO_r1
This SuperSeries is composed of the following SubSeries:
GSE163769 Gibbin drives epithelial development by toggling CTCF binding and DNA methylation
GSE165713 RNA-seq in wildtype and TFAP2A knockout non-neural ectoderm
GSE180491 The Xia-Gibbs Syndrome protein Gibbin regulates mesodermal DNA methylation to pattern epithelial development (RNA-Seq)
BioProject PRJNA748407

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180495_RAW.tar 8.2 Gb (http)(custom) TAR (of BROADPEAK, BW, IDAT, MTX, NARROWPEAK, TAR, TSV)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap