|
| Status |
Public on Jan 17, 2022 |
| Title |
Gibbin (AHDC1) regulates the mesoderm to pattern epithelial development |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by genome tiling array
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
35585237 |
| |
| Submission date |
Jul 20, 2021 |
| Last update date |
May 21, 2022 |
| Contact name |
Anthony Oro |
| Organization name |
Stanford University
|
| Department |
Dermatology
|
| Street address |
269 Campus Drvie
|
| City |
Stanford |
| State/province |
CA |
| ZIP/Postal code |
94305 |
| Country |
USA |
| |
|
| Platforms (4)
|
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL21145 |
Infinium MethylationEPIC |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (64)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE163769 |
Gibbin drives epithelial development by toggling CTCF binding and DNA methylation |
| GSE165713 |
RNA-seq in wildtype and TFAP2A knockout non-neural ectoderm |
| GSE180491 |
The Xia-Gibbs Syndrome protein Gibbin regulates mesodermal DNA methylation to pattern epithelial development (RNA-Seq) |
| GSE180492 |
The Xia-Gibbs Syndrome protein Gibbin regulates mesodermal DNA methylation to pattern epithelial development (ChIP-Seq) |
| GSE181971 |
The Xia-Gibbs Syndrome protein Gibbin regulates mesodermal DNA methylation to pattern epithelial development (HiChIP) |
| GSE181984 |
The Xia-Gibbs Syndrome protein Gibbin regulates mesodermal DNA methylation to pattern epithelial development (scRNA-Seq) |
| GSE185026 |
The Xia-Gibbs Syndrome protein Gibbin regulates mesodermal DNA methylation to pattern epithelial development (scRNA-Seq 2) |
| GSE194290 |
Gibbin (AHDC1) mesodermal regulation controls epithelial patterning |
|
| Relations |
| BioProject |
PRJNA748407 |
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