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Series GSE180813 Query DataSets for GSE180813
Status Public on Dec 03, 2022
Title Mettl3 regulates late-stage retinogenesis
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To study the function of Mettl3 during retinal development, we used Six3-Cre and Mettl3floxed mice to conditionally knock out Mettl3 from retinal progenitor cells. The mutant mice show defects in late-stage retinogenesis and structural and physiological homeostasis of the retina.
 
Overall design Retinas of postnatal day 7 Six3-Cre+; Mettl3floxed/floxed mice (4 samples), as well as retinas of their littermate control mice (4 samples), were collected into TRIZol, and processed for RNA-seq.
 
Contributor(s) Chen S
Citation(s) 36459087
Submission date Jul 25, 2021
Last update date Dec 15, 2022
Contact name SHUYI CHEN
E-mail(s) chenshy23@mail.sysu.edu.cn
Organization name Zhongshan Ophthalmic Center, SYSU
Department State Key Laboratory of Ophthalmology
Street address 54 S. Xianlie Rd
City Guangzhou
State/province Guangdong
ZIP/Postal code 510060
Country China
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (8)
GSM5471345 CKO_1
GSM5471346 CKO_2
GSM5471347 CKO_3
This SubSeries is part of SuperSeries:
GSE180815 Mettl3 regulates late-stage retinogenesis and mouse retina m6A epitranscriptome
Relations
BioProject PRJNA749618
SRA SRP329821

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE180813_gene_count.txt.gz 2.3 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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