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Series GSE185016 Query DataSets for GSE185016
Status Public on Feb 04, 2022
Title Chromosome conformation for wild type and clb5 clb6 strains arrested in meiotic prophase I
Organism Saccharomyces cerevisiae
Experiment type Other
Summary High-resolution Hi-C in meiotic prophase arrested cells
Overall design Purpose: to determine the impact of cohesive cohesin in anchoring cohesin mediated DNA loops, with a focus on the pericentromere.
Contributor(s) Massari LF, Marston AL, Robertson D
Citation(s) 35103590
Submission date Sep 29, 2021
Last update date Feb 09, 2022
Contact name Daniel Robertson
Organization name University of Edinburgh
Department Discovery Research Platform for Hidden Cell Biology
Lab Bioinformatics Core
Street address 2.28 Michael Swann Building, Kings Buildings, Mayfield Road
City Edinburgh
State/province Midlothian
ZIP/Postal code EH9 3JR
Country United Kingdom
Platforms (1)
GPL19756 Illumina NextSeq 500 (Saccharomyces cerevisiae)
Samples (2)
GSM5603466 HiC2_11633_wt
GSM5603467 HiC2_28841_clb5_clb6
This SubSeries is part of SuperSeries:
GSE185021 Eco1-dependent cohesin acetylation anchors chromatin loops and cohesion to define functional meiotic chromosome domains
BioProject PRJNA767383
SRA SRP339316

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185016_RAW.tar 20.3 Mb (http)(custom) TAR (of COOL)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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