NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE185018 Query DataSets for GSE185018
Status Public on Feb 04, 2022
Title Rec8 ChIP-seq for wild type, eco1-aa, wpl1Δ and eco1-aa wpl1Δ strains arrested in meiotic prophase I
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Genome binding/occupancy profiling of the cohesin subunit Rec8 by high throughput sequencing.
 
Overall design Purpose: to determine the relative contribution of Eco1 and Wpl1 in retaining and releasing cohesin from chromosomes, with a focus on centromere and pericentromere borders.
 
Contributor(s) Massari L, Marston A, Robertson D
Citation(s) 35103590
Submission date Sep 29, 2021
Last update date Feb 09, 2022
Contact name Daniel Robertson
E-mail(s) daniel.robertson@ed.ac.uk
Organization name University of Edinburgh
Department Discovery Research Platform for Hidden Cell Biology
Lab Bioinformatics Core
Street address 2.28 Michael Swann Building, Kings Buildings, Mayfield Road
City Edinburgh
State/province Midlothian
ZIP/Postal code EH9 3JR
Country United Kingdom
 
Platforms (1)
GPL22715 Illumina MiniSeq (Saccharomyces cerevisiae)
Samples (8)
GSM5603472 INPUT-Rec8_28719_wt
GSM5603473 INPUT-Rec8_28720_eco1-aa
GSM5603474 INPUT-Rec8_29750_wpl1
This SubSeries is part of SuperSeries:
GSE185021 Eco1-dependent cohesin acetylation anchors chromatin loops and cohesion to define functional meiotic chromosome domains
Relations
BioProject PRJNA767385
SRA SRP339317

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185018_RAW.tar 180.4 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap