|
| Status |
Public on Feb 04, 2022 |
| Title |
Eco1-dependent cohesin acetylation anchors chromatin loops and cohesion to define functional meiotic chromosome domains |
| Organisms |
Schizosaccharomyces pombe; Saccharomyces cerevisiae |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
Other
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
35103590 |
| |
| Submission date |
Sep 29, 2021 |
| Last update date |
Feb 08, 2022 |
| Contact name |
Daniel Robertson |
| E-mail(s) |
daniel.robertson@ed.ac.uk
|
| Organization name |
University of Edinburgh
|
| Department |
Discovery Research Platform for Hidden Cell Biology
|
| Lab |
Bioinformatics Core
|
| Street address |
2.28 Michael Swann Building, Kings Buildings, Mayfield Road
|
| City |
Edinburgh |
| State/province |
Midlothian |
| ZIP/Postal code |
EH9 3JR |
| Country |
United Kingdom |
| |
|
| Platforms (3) |
| GPL19756 |
Illumina NextSeq 500 (Saccharomyces cerevisiae) |
| GPL22715 |
Illumina MiniSeq (Saccharomyces cerevisiae) |
| GPL26296 |
Illumina MiniSeq (Saccharomyces cerevisiae; Schizosaccharomyces pombe) |
|
| Samples (44)
|
|
| This SuperSeries is composed of the following SubSeries:
|
| GSE185016 |
Chromosome conformation for wild type and clb5 clb6 strains arrested in meiotic prophase I |
| GSE185017 |
Chromosome conformation for wild type, eco1-aa, wpl1Δ and eco1-aa wpl1Δ strains arrested in meiotic prophase I |
| GSE185018 |
Rec8 ChIP-seq for wild type, eco1-aa, wpl1Δ and eco1-aa wpl1Δ strains arrested in meiotic prophase I |
| GSE185019 |
Calibrated Smc3 ChIP-seq for wild type, eco1-aa, wpl1-delta and eco1-aa wpl1-delta strains arrested in meiotic prophase I |
| GSE185020 |
Calibrated Smc3 ChIP-seq for wild type, smc3-2R, wpl1Δ and smc3-2R wpl1Δ strains arrested in meiotic prophase I |
| GSE196061 |
Chromosome conformation for wild type and clb5 clb6 strains arrested before meiotic S phase |
| GSE196063 |
Calibrated Smc3 ChIP-seq for wild type, eco1-aa, cdc6-mn and eco1-aa cdc6-mn strains arrested in meiotic prophase I |
| GSE196132 |
Chromosome conformation for wild type, eco1-aa, cdc6-mn and eco1-aa cdc6-mn strains arrested in meiotic prophase I |
|
| Relations |
| BioProject |
PRJNA767381 |
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