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Series GSE186135 Query DataSets for GSE186135
Status Public on Sep 26, 2022
Title The amniotic fluid proteome improves prediction of imminent delivery relative to quantitative cervical length: a cross-sectional study in women with a short cervix
Organism Homo sapiens
Experiment type Protein profiling by protein array
Summary For women identified as at risk for preterm birth attributable to a sonographic short cervix, the determination of imminent delivery is crucial for patient management. The current study aimed to identify amniotic fluid proteins that could predict imminent delivery in asymptomatic patients with a short cervix.
An aptamer-based multiplex platform was used to profile 1,310 AF proteins, and the significance of protein dysregulation was determined by moderated t-tests between women who destined to deliver within two weeks of amnicentesis.
The area under the receiver operating characteristic curve was calculated to determine whether protein abundance in combination with cervical length improved the prediction of imminent delivery after amnicentesis as compared to cervical length alone.
 
Overall design A cross-sectional study involving women who were diagnosed with a sonographic short cervix between 16 and 32 weeks of gestation and had a transabdominal amniocentesis performed within two days of the cervical length assessment.
 
Contributor(s) Gudicha DW, Romero R, Gomez-Lopez N, Galaz J, Bhatti G, Done B, Jung E, Gallo D, Bosco M, Suksai M, Diaz Primera R, Chaemsaithong P, Gotsch F, Berry SM, Chaiworapongsa T, Tarca AL
Citation(s) 35821507
Submission date Oct 19, 2021
Last update date Sep 26, 2022
Contact name Adi Tarca
E-mail(s) atarca@med.wayne.edu
Phone 313-577-5305
Organization name Wayne State University
Department Perinatology Research Branch (NIH/NICHD)
Lab Bioinformatics and Computational Biology Unit
Street address 3990 John R.
City Detroit
State/province Michigan
ZIP/Postal code 48201
Country USA
 
Platforms (1)
GPL23119 SOMAscan human proteomic assay [SOMAscan Assay 1.3k]
Samples (106)
GSM5639055 s1
GSM5639056 s2
GSM5639057 s3
Relations
BioProject PRJNA772718

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Supplementary data files not provided
Processed data included within Sample table

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