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Series GSE187659 Query DataSets for GSE187659
Status Public on Nov 04, 2021
Title ATAC-seq from CD8-positive naive resting alpha-beta T cell (ENCSR614JAG)
Project ENCODE
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR614JAG/
 
Citation(s) 22955616
BioProject PRJNA63443
Submission date Nov 03, 2021
Last update date Nov 10, 2021
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM5669158 ATAC-seq from CD8-positive naive resting alpha-beta T cell (ENCLB064MZN)
GSM5669159 ATAC-seq from CD8-positive naive resting alpha-beta T cell (ENCLB494JEI)

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE187659_ENCFF047UQF_conservative_IDR_thresholded_peaks_GRCh38.bed.gz 2.0 Mb (ftp)(http) BED
GSE187659_ENCFF094HDO_replicated_peaks_GRCh38.bed.gz 2.9 Mb (ftp)(http) BED
GSE187659_ENCFF250KUB_IDR_thresholded_peaks_GRCh38.bigBed 4.4 Mb (ftp)(http) BIGBED
GSE187659_ENCFF273AWR_IDR_thresholded_peaks_GRCh38.bed.gz 2.1 Mb (ftp)(http) BED
GSE187659_ENCFF483NBG_fold_change_over_control_GRCh38.bigWig 686.6 Mb (ftp)(http) BIGWIG
GSE187659_ENCFF552OEZ_pseudoreplicated_peaks_GRCh38.bigBed 6.5 Mb (ftp)(http) BIGBED
GSE187659_ENCFF555UEL_pseudoreplicated_peaks_GRCh38.bed.gz 2.9 Mb (ftp)(http) BED
GSE187659_ENCFF655XLU_replicated_peaks_GRCh38.bigBed 6.5 Mb (ftp)(http) BIGBED
GSE187659_ENCFF666ZWU_signal_p-value_GRCh38.bigWig 544.6 Mb (ftp)(http) BIGWIG
GSE187659_ENCFF696OAH_IDR_ranked_peaks_GRCh38.bed.gz 6.2 Mb (ftp)(http) BED
GSE187659_ENCFF846GSD_IDR_ranked_peaks_GRCh38.bed.gz 6.3 Mb (ftp)(http) BED
GSE187659_ENCFF973ALR_conservative_IDR_thresholded_peaks_GRCh38.bigBed 4.3 Mb (ftp)(http) BIGBED
GSE187659_RAW.tar 1.3 Gb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record
Processed data provided as supplementary file

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