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Series GSE188372 Query DataSets for GSE188372
Status Public on Oct 28, 2022
Title PPIB-regulated alternative splicing of cell cycle gene contributes to its regulation of cell proliferation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Background: Peptidylprolyl cis-trans isomerase B (PPIB) plays an important function in the process of inflammation through binding RNA, but the clear molecular pathogenesis is not completely understood. The objective of this study was to investigate the PPIB-regulated gene expression and alternative splicing.
 
Overall design transcrptional analysis of PPIB knockdown and control in Hela cells
 
Contributor(s) Zhang Y, Zhang S, Zhou M
Citation(s) 36247241
Submission date Nov 08, 2021
Last update date Oct 28, 2022
Contact name Dong Chen
Organization name ABLife, Inc.
Department Center for Genome Analysis
Street address 388 GaoXin 2nd Road, East Lake Hi-Tech Development Zone
City Wuhan
State/province Hubei
ZIP/Postal code 430075
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (4)
GSM5678355 HeLa shCtrl empty vector_1st
GSM5678356 HeLa shCtrl empty vector_2nd
GSM5678357 HeLa shPPIB_1st
Relations
BioProject PRJNA778646
SRA SRP345005

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE188372_expressed_gene_FPKM.txt.gz 680.5 Kb (ftp)(http) TXT
GSE188372_expressed_gene_reads.txt.gz 655.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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