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Series GSE189065 Query DataSets for GSE189065
Status Public on Apr 28, 2022
Title De novo variants of CSNK2B cause a new intellectual disability-craniodigital syndrome by disrupting the canonical Wnt signaling pathway
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Main purpose of the project is to investigate the consequences of de novo CSNK2B variant on transcriptome profiling of the patient compared to control. In this data, we seen differential expression of genes involved in the Wnt signaling pathway and transcription regulator.
 
Overall design We propose that the investigated variant disturb the canonical Wnt signaling pathway.
 
Contributor(s) Asif M, Wagle P, Nürnberg P, Hussain MS
Citation(s) 35571680
Submission date Nov 18, 2021
Last update date May 26, 2022
Contact name Muhammad Sajid Hussain
E-mail(s) mhussain@uni-koeln.de, mhussain@daad-alumni.de
Phone +4922147896808
Organization name University of Cologne
Department Cologne Center for Genomics
Street address Weyertal 115b
City Cologne
ZIP/Postal code 50931
Country Germany
 
Platforms (1)
GPL20301 Illumina HiSeq 4000 (Homo sapiens)
Samples (4)
GSM5694168 FP2
GSM5694169 MUT1
GSM5694170 Female Control1
Relations
BioProject PRJNA781446
SRA SRP346702

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE189065_FPKM.txt.gz 653.9 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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