GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE190778
Query DataSets for GSE190778
Status
Public on Aug 22, 2022
Title
Mediator facilitates transcription initiation at most promoters via a Tail-independent mechanism
Organism
Saccharomyces cerevisiae
Experiment type
Genome binding/occupancy profiling by high throughput sequencing
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
36208626
Submission date
Dec 13, 2021
Last update date
Jan 02, 2023
Contact name
Rafal Donczew
E-mail(s)
Rafal-donczew@omrf.org
Organization name
Oklahoma Medical Research Foundation
Department
Cell Cycle and Cancer Biology
Lab
Hahn Lab
Street address
825 NE 13th St
City
Oklahoma City
State/province
OK
ZIP/Postal code
73104
Country
USA
Platforms (1)
GPL17342
Illumina HiSeq 2500 (Saccharomyces cerevisiae)
Samples (256)
Less...
More...
GSM5731353
Eaf5_A (ChEC-seq)
GSM5731354
Eaf5_B (ChEC-seq)
GSM5731355
Eaf5_C (ChEC-seq)
GSM5731356
freeMNase_A (ChEC-seq)
GSM5731357
freeMNase_B (ChEC-seq)
GSM5731358
freeMNase_C (ChEC-seq)
GSM5731359
freeMNase_D (ChEC-seq)
GSM5731360
Med10_Mnase_kin28is_CMK_A (ChEC-seq)
GSM5731361
Med10_Mnase_kin28is_CMK_B (ChEC-seq)
GSM5731362
Med10_Mnase_kin28is_DMSO_A (ChEC-seq)
GSM5731363
Med10_Mnase_kin28is_DMSO_B (ChEC-seq)
GSM5731364
Med10_Mnase_Med14_deg_DMSO_A (ChEC-seq)
GSM5731365
Med10_Mnase_Med14_deg_DMSO_B (ChEC-seq)
GSM5731366
Med10_Mnase_Med14_deg_DMSO_C (ChEC-seq)
GSM5731367
Med10_Mnase_Med14_deg_IAA_A (ChEC-seq)
GSM5731368
Med10_Mnase_Med14_deg_IAA_B (ChEC-seq)
GSM5731369
Med10_Mnase_Med14_deg_IAA_C (ChEC-seq)
GSM5731370
Med10_Mnase_TID2_deg_DMSO_A (ChEC-seq)
GSM5731371
Med10_Mnase_TID2_deg_DMSO_B (ChEC-seq)
GSM5731372
Med10_Mnase_TID2_deg_DMSO_C (ChEC-seq)
GSM5731373
Med10_Mnase_TID2_deg_IAA_A (ChEC-seq)
GSM5731374
Med10_Mnase_TID2_deg_IAA_B (ChEC-seq)
GSM5731375
Med10_Mnase_TID2_deg_IAA_C (ChEC-seq)
GSM5731376
Med15_A (ChEC-seq)
GSM5731377
Med15_B (ChEC-seq)
GSM5731378
Med15_C (ChEC-seq)
GSM5731379
Med15_Mnase_Med14_deg_DMSO_A (ChEC-seq)
GSM5731380
Med15_Mnase_Med14_deg_DMSO_B (ChEC-seq)
GSM5731381
Med15_Mnase_Med14_deg_DMSO_C (ChEC-seq)
GSM5731382
Med15_Mnase_Med14_deg_IAA_A (ChEC-seq)
GSM5731383
Med15_Mnase_Med14_deg_IAA_B (ChEC-seq)
GSM5731384
Med15_Mnase_Med14_deg_IAA_C (ChEC-seq)
GSM5731385
Med17_Mnase_TID2_deg_DMSO_A (ChEC-seq)
GSM5731386
Med17_Mnase_TID2_deg_DMSO_B (ChEC-seq)
GSM5731387
Med17_Mnase_TID2_deg_DMSO_C (ChEC-seq)
GSM5731388
Med17_Mnase_TID2_deg_IAA_A (ChEC-seq)
GSM5731389
Med17_Mnase_TID2_deg_IAA_B (ChEC-seq)
GSM5731390
Med17_Mnase_TID2_deg_IAA_C (ChEC-seq)
GSM5731393
Med19_Mnase_kin28is_DMSO_A (ChEC-seq)
GSM5731394
Med19_Mnase_kin28is_DMSO_B (ChEC-seq)
GSM5731395
Med8_A (ChEC-seq)
GSM5731396
Med8_B (ChEC-seq)
GSM5731397
Med8_C (ChEC-seq)
GSM5731398
Med8_Mnase_Med14_deg_DMSO_A (ChEC-seq)
GSM5731399
Med8_Mnase_Med14_deg_DMSO_B (ChEC-seq)
GSM5731400
Med8_Mnase_Med14_deg_DMSO_C (ChEC-seq)
GSM5731401
Med8_Mnase_Med14_deg_IAA_A (ChEC-seq)
GSM5731402
Med8_Mnase_Med14_deg_IAA_B (ChEC-seq)
GSM5731403
Med8_Mnase_Med14_deg_IAA_C (ChEC-seq)
GSM5731404
Snf5_A (ChEC-seq)
GSM5731405
Snf5_B (ChEC-seq)
GSM5731406
Snf5_C (ChEC-seq)
GSM5731407
Swr1_A (ChEC-seq)
GSM5731408
Swr1_B (ChEC-seq)
GSM5731409
Swr1_C (ChEC-seq)
GSM5731419
Med10_TFIIB_DMSO_AI (ChIP-seq)
GSM5731420
Med10_TFIIB_DMSO_A (ChIP-seq)
GSM5731421
Med10_TFIIB_DMSO_BI (ChIP-seq)
GSM5731422
Med10_TFIIB_DMSO_B (ChIP-seq)
GSM5731423
Med10_TFIIB_IAA_AI (ChIP-seq)
GSM5731424
Med10_TFIIB_IAA_A (ChIP-seq)
GSM5731425
Med10_TFIIB_IAA_BI (ChIP-seq)
GSM5731426
Med10_TFIIB_IAA_B (ChIP-seq)
GSM5731427
Med14_TFIIB_DMSO_AI (ChIP-seq)
GSM5731428
Med14_TFIIB_DMSO_A (ChIP-seq)
GSM5731429
Med14_TFIIB_DMSO_BI (ChIP-seq)
GSM5731430
Med14_TFIIB_DMSO_B (ChIP-seq)
GSM5731431
Med14_TFIIB_IAA_AI (ChIP-seq)
GSM5731432
Med14_TFIIB_IAA_A (ChIP-seq)
GSM5731433
Med14_TFIIB_IAA_BI (ChIP-seq)
GSM5731434
Med14_TFIIB_IAA_B (ChIP-seq)
GSM5731435
Med15_TFIIB_DMSO_AI (ChIP-seq)
GSM5731436
Med15_TFIIB_DMSO_A (ChIP-seq)
GSM5731437
Med15_TFIIB_DMSO_BI (ChIP-seq)
GSM5731438
Med15_TFIIB_DMSO_B (ChIP-seq)
GSM5731439
Med15_TFIIB_IAA_AI (ChIP-seq)
GSM5731440
Med15_TFIIB_IAA_A (ChIP-seq)
GSM5731441
Med15_TFIIB_IAA_BI (ChIP-seq)
GSM5731442
Med15_TFIIB_IAA_B (ChIP-seq)
GSM5731443
CCL1_3IAA_A (RNA-seq)
GSM5731444
CCL1_3IAA_B (RNA-seq)
GSM5731445
CCL1_3IAA_C (RNA-seq)
GSM5731446
CCL1_DMSO_A (RNA-seq)
GSM5731447
CCL1_DMSO_B (RNA-seq)
GSM5731448
CCL1_DMSO_C (RNA-seq)
GSM5731449
CDK8_3IAA_A (RNA-seq)
GSM5731450
CDK8_3IAA_B (RNA-seq)
GSM5731451
CDK8_3IAA_C (RNA-seq)
GSM5731452
CDK8_DMSO_A (RNA-seq)
GSM5731453
CDK8_DMSO_B (RNA-seq)
GSM5731454
CDK8_DMSO_C (RNA-seq)
GSM5731455
Med10_3IAA_A (RNA-seq)
GSM5731456
Med10_3IAA_B (RNA-seq)
GSM5731457
Med10_3IAA_C (RNA-seq)
GSM5731458
Med10_DMSO_A (RNA-seq)
GSM5731459
Med10_DMSO_B (RNA-seq)
GSM5731460
Med10_DMSO_C (RNA-seq)
GSM5731461
Med12_3IAA_A (RNA-seq)
GSM5731462
Med12_3IAA_B (RNA-seq)
GSM5731463
Med12_3IAA_C (RNA-seq)
GSM5731464
Med12_DMSO_A (RNA-seq)
GSM5731465
Med12_DMSO_B (RNA-seq)
GSM5731466
Med12_DMSO_C (RNA-seq)
GSM5731467
Med1_3IAA_A (RNA-seq)
GSM5731468
Med1_3IAA_B (RNA-seq)
GSM5731469
Med1_3IAA_C (RNA-seq)
GSM5731470
Med14_3IAA_A (RNA-seq)
GSM5731471
Med14_3IAA_B (RNA-seq)
GSM5731472
Med14_3IAA_C (RNA-seq)
GSM5731473
Med14C_3IAA_A (RNA-seq)
GSM5731474
Med14C_3IAA_B (RNA-seq)
GSM5731475
Med14C_3IAA_C (RNA-seq)
GSM5731476
Med14C_DMSO_A (RNA-seq)
GSM5731477
Med14C_DMSO_B (RNA-seq)
GSM5731478
Med14C_DMSO_C (RNA-seq)
GSM5731479
Med14_DMSO_A (RNA-seq)
GSM5731480
Med14_DMSO_B (RNA-seq)
GSM5731481
Med14_DMSO_C (RNA-seq)
GSM5731484
Med1_5_3IAA_A (RNA-seq)
GSM5731485
Med15_3IAA_A (RNA-seq)
GSM5731486
Med1_5_3IAA_B (RNA-seq)
GSM5731487
Med15_3IAA_B (RNA-seq)
GSM5731488
Med1_5_3IAA_C (RNA-seq)
GSM5731489
Med15_3IAA_C (RNA-seq)
GSM5731492
Med1_5_DMSO_A (RNA-seq)
GSM5731493
Med15_DMSO_A (RNA-seq)
GSM5731494
Med1_5_DMSO_B (RNA-seq)
GSM5731495
Med15_DMSO_B (RNA-seq)
GSM5731496
Med1_5_DMSO_C (RNA-seq)
GSM5731497
Med15_DMSO_C (RNA-seq)
GSM5731504
Med15_Med16_3IAA_A (RNA-seq)
GSM5731505
Med15_Med16_3IAA_B (RNA-seq)
GSM5731506
Med15_Med16_3IAA_C (RNA-seq)
GSM5731507
Med15_Med16_DMSO_A (RNA-seq)
GSM5731508
Med15_Med16_DMSO_B (RNA-seq)
GSM5731509
Med15_Med16_DMSO_C (RNA-seq)
GSM5731528
Med15_Spt7_DMSO_A (RNA-seq)
GSM5731529
Med15_Spt7_DMSO_B (RNA-seq)
GSM5731530
Med15_Spt7_DMSO_C (RNA-seq)
GSM5731531
Med15_Taf1_3IAA_A (RNA-seq)
GSM5731532
Med15_Taf1_3IAA_B (RNA-seq)
GSM5731533
Med15_Taf1_3IAA_C (RNA-seq)
GSM5731534
Med15_Taf1_DMSO_A (RNA-seq)
GSM5731535
Med15_Taf1_DMSO_B (RNA-seq)
GSM5731536
Med15_Taf1_DMSO_C (RNA-seq)
GSM5731537
Med16_3IAA_A (RNA-seq)
GSM5731538
Med16_3IAA_B (RNA-seq)
GSM5731539
Med16_3IAA_C (RNA-seq)
GSM5731542
Med16_DMSO_A (RNA-seq)
GSM5731543
Med16_DMSO_B (RNA-seq)
GSM5731544
Med16_DMSO_C (RNA-seq)
GSM5731545
Med17_3IAA_A (RNA-seq)
GSM5731546
Med17_3IAA_B (RNA-seq)
GSM5731547
Med17_3IAA_C (RNA-seq)
GSM5731548
Med17_DMSO_A (RNA-seq)
GSM5731549
Med17_DMSO_B (RNA-seq)
GSM5731550
Med17_DMSO_C (RNA-seq)
GSM5731551
Med19_3IAA_A (RNA-seq)
GSM5731552
Med19_3IAA_B (RNA-seq)
GSM5731553
Med19_3IAA_C (RNA-seq)
GSM5731554
Med19_DMSO_A (RNA-seq)
GSM5731555
Med19_DMSO_B (RNA-seq)
GSM5731556
Med19_DMSO_C (RNA-seq)
GSM5731557
Med1_DMSO_A (RNA-seq)
GSM5731558
Med1_DMSO_B (RNA-seq)
GSM5731559
Med1_DMSO_C (RNA-seq)
GSM5731560
Med2_15_3IAA_A (RNA-seq)
GSM5731561
Med2_15_3IAA_B (RNA-seq)
GSM5731562
Med2_15_3IAA_C (RNA-seq)
GSM5731563
Med2_15_DMSO_A (RNA-seq)
GSM5731564
Med2_15_DMSO_B (RNA-seq)
GSM5731565
Med2_15_DMSO_C (RNA-seq)
GSM5731566
Med21_EWE4_A (RNA-seq)
GSM5731567
Med21_EWE4_B (RNA-seq)
GSM5731568
Med21_WT_A (RNA-seq)
GSM5731569
Med21_WT_B (RNA-seq)
GSM5731576
Med31_3IAA_A (RNA-seq)
GSM5731577
Med31_3IAA_B (RNA-seq)
GSM5731578
Med31_3IAA_C (RNA-seq)
GSM5731579
Med31_DMSO_A (RNA-seq)
GSM5731580
Med31_DMSO_B (RNA-seq)
GSM5731581
Med31_DMSO_C (RNA-seq)
GSM5731582
Med5_3IAA_A (RNA-seq)
GSM5731583
Med5_3IAA_B (RNA-seq)
GSM5731584
Med5_3IAA_C (RNA-seq)
GSM5731585
Med5_DMSO_A (RNA-seq)
GSM5731586
Med5_DMSO_B (RNA-seq)
GSM5731587
Med5_DMSO_C (RNA-seq)
GSM5731588
Med6_delH1_A (RNA-seq)
GSM5731589
Med6_delH1_B (RNA-seq)
GSM5731590
Med6_delH1_C (RNA-seq)
GSM5731591
Med6_WT_A (RNA-seq)
GSM5731592
Med6_WT_B (RNA-seq)
GSM5731593
Med6_WT_C (RNA-seq)
GSM5731594
Med7_3IAA_A (RNA-seq)
GSM5731595
Med7_3IAA_B (RNA-seq)
GSM5731596
Med7_3IAA_C (RNA-seq)
GSM5731597
Med7C_3IAA_A (RNA-seq)
GSM5731598
Med7C_3IAA_B (RNA-seq)
GSM5731599
Med7C_3IAA_C (RNA-seq)
GSM5731600
Med7C_DMSO_A (RNA-seq)
GSM5731601
Med7C_DMSO_B (RNA-seq)
GSM5731602
Med7C_DMSO_C (RNA-seq)
GSM5731603
Med7_DMSO_A (RNA-seq)
GSM5731604
Med7_DMSO_B (RNA-seq)
GSM5731605
Med7_DMSO_C (RNA-seq)
GSM5731606
Med7_EWE3_A (RNA-seq)
GSM5731607
Med7_EWE3_B (RNA-seq)
GSM5731608
Med7N_3IAA_A (RNA-seq)
GSM5731609
Med7N_3IAA_B (RNA-seq)
GSM5731610
Med7N_3IAA_C (RNA-seq)
GSM5731611
med7N_del_A (RNA-seq)
GSM5731612
med7N_del_B (RNA-seq)
GSM5731613
med7N_del_C (RNA-seq)
GSM5731614
Med7N_DMSO_A (RNA-seq)
GSM5731615
Med7N_DMSO_B (RNA-seq)
GSM5731616
Med7N_DMSO_C (RNA-seq)
GSM5731617
Med7_WT_A (RNA-seq)
GSM5731618
Med7_WT_B (RNA-seq)
GSM5731619
Med7_WT_C (RNA-seq)
GSM5731620
Med9_3IAA_A (RNA-seq)
GSM5731621
Med9_3IAA_B (RNA-seq)
GSM5731622
Med9_3IAA_C (RNA-seq)
GSM5731623
Med9_DMSO_A (RNA-seq)
GSM5731624
Med9_DMSO_B (RNA-seq)
GSM5731625
Med9_DMSO_C (RNA-seq)
GSM5731626
TID_3IAA_A (RNA-seq)
GSM5731627
TID_3IAA_B (RNA-seq)
GSM5731628
TID_3IAA_C (RNA-seq)
GSM5731629
TID_DMSO_A (RNA-seq)
GSM5731630
TID_DMSO_B (RNA-seq)
GSM5731631
TID_DMSO_C (RNA-seq)
GSM6213586
med15del_A (RNA-seq)
GSM6213587
med15del_B (RNA-seq)
GSM6213588
med15del_C (RNA-seq)
GSM6213589
Med15_DMSO_HS_A (RNA-seq)
GSM6213590
Med15_DMSO_HS_B (RNA-seq)
GSM6213591
Med15_DMSO_HS_C (RNA-seq)
GSM6213592
Med15_DMSO_no_stress_A (RNA-seq)
GSM6213593
Med15_DMSO_no_stress_B (RNA-seq)
GSM6213594
Med15_DMSO_no_stress_C (RNA-seq)
GSM6213595
Med15_DMSO_SM_A (RNA-seq)
GSM6213596
Med15_DMSO_SM_B (RNA-seq)
GSM6213597
Med15_DMSO_SM_C (RNA-seq)
GSM6213598
Med15_IAA_HS_A (RNA-seq)
GSM6213599
Med15_IAA_HS_B (RNA-seq)
GSM6213600
Med15_IAA_HS_C (RNA-seq)
GSM6213601
Med15_IAA_SM_A (RNA-seq)
GSM6213602
Med15_IAA_SM_B (RNA-seq)
GSM6213603
Med15_IAA_SM_C (RNA-seq)
GSM6213604
med16del_A (RNA-seq)
GSM6213605
med16del_B (RNA-seq)
GSM6213606
med16del_C (RNA-seq)
GSM6213607
WT_A (RNA-seq)
GSM6213608
WT_B (RNA-seq)
GSM6213609
WT_C (RNA-seq)
This SuperSeries is composed of the following SubSeries:
GSE190774
Mediator facilitates transcription initiation at most promoters via a Tail-independent mechanism [ChEC-seq]
GSE190776
Mediator facilitates transcription initiation at most promoters via a Tail-independent mechanism [ChIP-seq]
GSE190777
Mediator facilitates transcription initiation at most promoters via a Tail-independent mechanism [RNA-seq]
Relations
BioProject
PRJNA788461
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE190778_RAW.tar
2.3 Gb
(http)
(custom)
TAR (of CSV, WIG)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|