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Series GSE192382 Query DataSets for GSE192382
Status Public on Feb 24, 2022
Title Influence of the downregulation of the MARS lncRNA (AT5G00580) of the response to Abscisic acid (ABA) in Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary We analyze the effect of the downexpression of the lncRNA MARS (AT5G00580) on the transcriptome in response to ABA treatment. 12 DAS seedlings were harvested and total RNA extracted for RNA sequencing.
Overall design RNA-seq experiments (polyA+ RNA) in triplicates for each condition (before or after 4h after ABA spray) and genotype (Col-0 and RNAI-MARS-1 lines).
Contributor(s) Blein T, Christ A, Roulé T, Crespi M
Citation(s) 35150931
Submission date Dec 21, 2021
Last update date May 27, 2022
Contact name Thomas Blein
Organization name CNRS
Lab IPS2
Street address rue de Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (12)
GSM5745870 Col0_0h_A
GSM5745871 Col0_0h_B
GSM5745872 Col0_0h_C
BioProject PRJNA791315
SRA SRP351935

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE192382_RAW.tar 2.8 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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