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Series GSE192469 Query DataSets for GSE192469
Status Public on Jun 07, 2023
Title ELONGATED HYPOCOTYL (HY5) AND HY5 HOMOLOG (HYH) maintain shade avoidance suppression in sunlight
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary We show that longer-term inhibition of shade avoidance in Arabidopsis is sustained by ELONGATED HYPOCOTYL 5 (HY5) and HY5 HOMOLOG (HYH) which, together, regulate transcriptional reprogramming of genes involved in hormone signalling and cell wall modification.
Overall design Monitoring of gene expression in Arabidopsis thaliana wild type (Wassilewskija) individuals and hy5/hyh mutants under different light conditions.
Contributor(s) Franklin KA
Citation(s) 37243898
Submission date Dec 22, 2021
Last update date Apr 04, 2024
Contact name Keara Franklin
Organization name University of Bristol
Department School of Biological Sciences
Street address 24 Tyndall Avenue
City Bristol
ZIP/Postal code BS8 1TQ
Country United Kingdom
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (24)
GSM5747582 WS-FR-UV rep2
GSM5747583 hy5hyh-FR-UV rep3
GSM5747584 hy5hyh-FR-UV rep1
BioProject PRJNA791625

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE192469_all_counts.txt.gz 1.1 Mb (ftp)(http) TXT
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Processed data are available on Series record

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