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Series GSE196061 Query DataSets for GSE196061
Status Public on Feb 04, 2022
Title Chromosome conformation for wild type and clb5 clb6 strains arrested before meiotic S phase
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary High-resolution Hi-C in meiotic pre-S phase cells
 
Overall design Purpose: to determine the impact of cohesive cohesin in anchoring cohesin mediated DNA loops before entry into meiosis, with a focus on the pericentromere.
 
Contributor(s) Massari LF, Marston AL, Robertson D
Citation(s) 35103590
Submission date Feb 03, 2022
Last update date Feb 09, 2022
Contact name Daniel Robertson
E-mail(s) daniel.robertson@ed.ac.uk
Organization name University of Edinburgh
Department Discovery Research Platform for Hidden Cell Biology
Lab Bioinformatics Core
Street address 2.28 Michael Swann Building, Kings Buildings, Mayfield Road
City Edinburgh
State/province Midlothian
ZIP/Postal code EH9 3JR
Country United Kingdom
 
Platforms (1)
GPL19756 Illumina NextSeq 500 (Saccharomyces cerevisiae)
Samples (2)
GSM5858753 wild type
GSM5858754 clb5 clb6
This SubSeries is part of SuperSeries:
GSE185021 Eco1-dependent cohesin acetylation anchors chromatin loops and cohesion to define functional meiotic chromosome domains
Relations
BioProject PRJNA803197

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196061_RAW.tar 31.8 Mb (http)(custom) TAR (of COOL)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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