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Series GSE196571 Query DataSets for GSE196571
Status Public on Jun 09, 2022
Title Gene expression in glucose-grown P. putida KT2440 before and after 5 mM catechol addition
Organism Pseudomonas putida KT2440
Experiment type Expression profiling by array
Summary mRNA was sampled during exponential growth (OD600 = 2, Control), then an inhibitory dose of 5 mM catechol was added to the culture and samples were taken again after 1h (Stress)
 
Overall design 3 biological replicates yielded one control and one stress sample each (total of 6 samples)
 
Contributor(s) Weimer A, Kohlstedt M, Wittmann C
Citation(s) 35545205
Submission date Feb 11, 2022
Last update date Jun 11, 2022
Contact name Michael Kohlstedt
E-mail(s) michael.kohlstedt@uni-saarland.de
Organization name Saarland University
Street address Campus A1.5
City Saarbruecken
ZIP/Postal code 66123
Country Germany
 
Platforms (1)
GPL31933 Agilent-086294 Pseudomonas putida KT2440 array (Probe name version)
Samples (6)
GSM5889250 Glucose RepA (Ctrl)
GSM5889251 Glucose RepB (Ctrl)
GSM5889252 Glucose RepC (Ctrl)
Relations
BioProject PRJNA805518

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE196571_RAW.tar 15.5 Mb (http)(custom) TAR (of TXT)
GSE196571_dataset_complete_processed.csv.gz 240.5 Kb (ftp)(http) CSV
GSE196571_dataset_significant_only_proccessed.csv.gz 62.1 Kb (ftp)(http) CSV
Processed data included within Sample table
Processed data are available on Series record

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