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Series GSE197099 Query DataSets for GSE197099
Status Public on Feb 01, 2023
Title TOR early response genes in plant shoots
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary We identified TOR target genes using three different TOR active site inhbitors AZD8055, TORIN1 and KU63749 in Arabidopsis thaliana shoots
Overall design We compare the transcriptome of three different TOR active site inhibitors with mock treated plants 8 h after transfer.
Contributor(s) Janocha D, Pfeiffer A, Lohmann J
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Submission date Feb 21, 2022
Last update date Feb 03, 2023
Contact name Denis Janocha
Organization name Center for Organismal Studies, Heidelberg University
Department Stem cell research
Lab AG Jan Lohmann
Street address INF 230
City Heidelberg
ZIP/Postal code 69120
Country Germany
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (12)
GSM5908653 shoot, Mock Rep.1
GSM5908654 shoot, Mock Rep.2
GSM5908655 shoot, Mock Rep.3
BioProject PRJNA808976

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197099_RAW.tar 1.4 Mb (http)(custom) TAR (of TXT)
GSE197099_ShootSEQ_DESeqResults.xlsx 1.5 Mb (ftp)(http) XLSX
GSE197099_ShootSEQ_NormalizedCounts.tabular.txt.gz 1.6 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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