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Series GSE200247 Query DataSets for GSE200247
Status Public on Jul 30, 2023
Title RNA-seq experiment of wild-type (WT) and pif4 mutant seedlings grown for 3 days in darkness and exposed or not to heat stress for 3 hours.
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary Transcriptome profiles of wild-type (WT), pif4-101, and transgenic plants expressing the coding region of PIF4 under the control of its endogenous promoter (H71 and H76; pif4-101 mutant background) grown for 3 days in the dark at 22ºC and then, for 3 additional hours, exposed or not to heat stress (37ºC).
 
Overall design Triplicate biological samples were analyzed.
 
Contributor(s) Martín G, Duque P
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Apr 05, 2022
Last update date Jul 30, 2023
Contact name Guiomar Martín
E-mail(s) guiomarm@igc.gulbenkian.pt
Organization name Instituto Gulbenkian de Ciência
Department Plant Molecular Biology
Street address Rua da Quinta Grande, 6
City Oeiras
State/province Lisboa
ZIP/Postal code 2780-156
Country Portugal
 
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (24)
GSM6025419 non-treated WT seedlings rep1
GSM6025420 non-treated WT seedlings rep2
GSM6025421 non-treated WT seedlings rep3
Relations
BioProject PRJNA823735

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE200247_cRPKM_AND_COUNTS-araTha10-24.tab.gz 2.0 Mb (ftp)(http) TAB
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Raw data are available in SRA
Processed data are available on Series record

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