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Series GSE202266 Query DataSets for GSE202266
Status Public on Sep 21, 2023
Title Effect of trans-vaccenic acid(TVA) diet on 16S ribosomal RNA (rRNA) expression of mouse gut microbiome
Organism feces metagenome
Experiment type Other
Summary To investigate the TVA diet's effect on mouse gut microbiome, we fed C57/BL6 mice with TVA diet or CON diet for 18 days
We then collected feces of the mice and performed 16S ribosomal RNA (rRNA) sequencing.
 
Overall design Comparative gene expression profiling analysis of 16S rRNAseq data for CON group and TVA group.
 
Contributor(s) Fan H, Dong L, Su R, Gao X, Chen J
Citation(s) 37993715
Submission date May 05, 2022
Last update date Dec 07, 2023
Contact name fan hao
E-mail(s) haofan@uchicago.edu
Organization name University of Chicago
Street address 5801 S Ellis Ave
City Chicago
State/province IL
ZIP/Postal code 60637
Country USA
 
Platforms (1)
GPL24937 Illumina HiSeq 2500 (feces metagenome)
Samples (14)
GSM6107489 Mouse gut feces, TVA diet (zr4773_1V3V4)
GSM6107490 Mouse gut feces, TVA diet (zr4773_2V3V4)
GSM6107491 Mouse gut feces, TVA diet (zr4773_3V3V4)
This SubSeries is part of SuperSeries:
GSE202340 Dietary trans-vaccenic acid promotes anti-tumor immunity
Relations
BioProject PRJNA835303

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202266_RAW.tar 50.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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