|
| Status |
Public on May 01, 2024 |
| Title |
Lamin B1 ChIP-seq analysis of alveolar type 1 and type 2 cells. |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
The goal of this study was to compare lamina-associated chromatin between alveolar type 1 and type 2 cells.
|
| |
|
| Overall design |
AT1 cells and AT2 cells were sorted from AT1 reporter Hopx-EGFP mice or AT2 reporter Sftpc-EGFP mice.
|
| |
|
| Contributor(s) |
Shiraishi K, Shah P, Morley MP, Jain R, Morrisey EE |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 05, 2022 |
| Last update date |
May 01, 2024 |
| Contact name |
Michael Patrick Morley |
| E-mail(s) |
mmorley@pennmedicine.upenn.edu
|
| Phone |
215-898-2026
|
| Organization name |
Perelman School of Medicine at the University of Pennsylvania
|
| Department |
Penn Cardiovascular Institute
|
| Street address |
3400 Civic Center Blvd, Bldg 421
|
| City |
Philadelphia |
| State/province |
PA |
| ZIP/Postal code |
19104 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
|
| Samples (8)
|
| GSM6108305 |
AT1, Input, sample 2 |
| GSM6108306 |
AT2, LB1, sample 1 |
| GSM6108307 |
AT2, LB1, sample 2 |
| GSM6108308 |
AT2, Input, sample 1 |
| GSM6108309 |
AT2, Input, sample 2 |
|
| This SubSeries is part of SuperSeries: |
| GSE202319 |
Mechanotransduction mediated by cyclical respiratory motion maintains lung alveolar epithelial cell fate |
|
| Relations |
| BioProject |
PRJNA835453 |
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