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Series GSE202390 Query DataSets for GSE202390
Status Public on Jul 01, 2022
Title The antibody landscapes against Group 1 and 2 influenza virus hemagglutinin following AS03 and MF59 adjuvanted H5N1 vaccination (probing_4_igg)
Platform organisms Influenza A virus; Influenza B virus
Sample organism Homo sapiens
Experiment type Protein profiling by protein array
Summary Current seasonal and pre-pandemic influenza vaccines induce short-lived predominantly strain-specific and limited heterosubtypic responses. To better understand how vaccine adjuvants AS03 and MF59 may provide improved antibody responses to vaccination, we interrogated serum from subjects who received 2 doses of inactivated monovalent influenza A/Indonesia/05/2005 vaccine with or without AS03 or MF59 using hemagglutinin (HA) microarrays (NCT01317758 and NCT01317745). The arrays were designed to reflect both full length and globular head HA derived from 17 influenza A subtypes (H1 to H16 and H18) and influenza B strains. We observed significantly increased strain-specific and broad homo- and hetero-subtypic antibody responses with both AS03 and MF59 adjuvanted vaccination with AS03 achieving a higher titer and breadth of IgG responses relative to MF59. Adjuvanted vaccine was also associated with the elicitation of stalk directed antibody. We established good correlation of the array antibody responses to H5 antigens with standard HA inhibition and microneutralization titers.
 
Overall design We constructed two sets of influenza-specific high-density protein microarrays which comprised purified HA proteins derived from 17 influenza A virus subtypes and influenza B virus strains, including conformationally correct stabilize trimers. Our present study was designed to measure the landscape of the antibody responses in response to vaccination with an inactivated, monovalent, subvirion influenza A/Indonesia/05/2005 (H5N1) strain vaccine when administered alone (unadjuvanted) or with AS03 or MF59 adjuvant. Importantly, using stabilized trimeric headless stalk protein (HA2) in competitive inhibition assays, we indirectly assessed the elicitation of stalk-directed antibodies. Finally, the concordance between microarray subtype specific antibody levels and HAI and MN titers were evaluated.
 
Contributor(s) Goll JB, Jain A, Jensen TL, Assis R, Nakajima R, Jasinskas A, Coughlan L, Cherikh SR, Gelber CE, Khan S, Davies DH, Meade P, Stadlbauer D, Strohmeier S, Krammer F, Chen WH, Felgner PL
Citation(s) 36042229
Submission date May 06, 2022
Last update date Sep 15, 2022
Contact name Johannes Goll
Organization name The Emmes Company
Department Bioinformatics Service Group
Street address 401 N Washington St
City Rockville
State/province MD
ZIP/Postal code 20850
Country USA
 
Platforms (1)
GPL32237 Influenza hemagglutinin array 2
Samples (450)
GSM6115316 SAM77_m10_probing_4_igg
GSM6115317 SAM77_r50_probing_4_igg
GSM6115318 SAM77_nop_probing_4_igg
This SubSeries is part of SuperSeries:
GSE202392 The antibody landscapes against Group 1 and 2 influenza virus hemagglutinin following AS03 and MF59 adjuvanted H5N1 vaccination
Relations
BioProject PRJNA835828

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202390_probing_4_igg_not_norm.csv.gz 816.1 Kb (ftp)(http) CSV
GSE202390_processed_data.txt.gz 559.4 Kb (ftp)(http) TXT
Processed data are available on Series record

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