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Series GSE202950 Query DataSets for GSE202950
Status Public on Sep 20, 2022
Title A BDNF-TrkB autocrine loop enhances senescent cell viability [scRNA-seq]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We used single cell RNA sequencing (scRNA-seq) to investigate the RNA expression correlation between BDNF and STAT3-associated targets in etoposide-treated human fibroblast cell populations.
 
Overall design Proliferating human fibroblasts (WI-38 cells) were treated with etoposide to trigger senescent-like phenotypes. Cells were trypsinized, washed and then subjected to scRNA-seq experiment.
 
Contributor(s) Anerillas C, Lam KG
Citation(s) 36266274
Submission date May 13, 2022
Last update date Oct 28, 2022
Contact name Supriyo De
Organization name NIA-IRP, NIH
Department Laboratory of Genetics and Genomics
Lab Computational Biology & Genomics Core
Street address 251 Bayview Blvd
City Baltimore
State/province Maryland
ZIP/Postal code 21224
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (1)
GSM6139169 WI-38, etoposide treated, scRNA-seq
This SubSeries is part of SuperSeries:
GSE202951 A BDNF-TrkB autocrine loop enhances senescent cell viability
Relations
BioProject PRJNA837874

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Supplementary file Size Download File type/resource
GSE202950_RAW.tar 27.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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