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Series GSE204698 Query DataSets for GSE204698
Status Public on Jun 28, 2022
Title The Transcription Factor ThPOK Regulates ILC3 Lineage Homeostasis and Function during Intestinal Infection II
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To investigate the role of ThPOK in the regulation of ILC3 development and function, we established conventional ThPOK knockout mice and carried out single-cell RNA sequencing (BD Rhapsody) on intestinal ILC3s.
 
Overall design ILC3s from 6-week-old male C57BL/6 mice were isolated from the small intestine and analyzed by single-cell RNA sequencing technology (BD Rhapsody).
 
Contributor(s) Gao X, Wang L
Citation(s) 35844574
Submission date May 24, 2022
Last update date Sep 27, 2022
Contact name lie wang
E-mail(s) wanglie@zju.edu.cn
Organization name zhejiang universiry
Department immunology
Street address Zijingang Campus, Zhejiang Universityļ¼ŒYuhangtang Road 866
City hangzhou
State/province zhejiang
ZIP/Postal code 310058
Country China
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (3)
GSM6185996 Group 3 innate lymphoid cell, WT rep1, scRNAseq
GSM6185997 Group 3 innate lymphoid cell, WT rep2, scRNAseq
GSM6185998 Group 3 innate lymphoid cell, ThPOK-deficient rep1 and 2, scRNAseq
Relations
BioProject PRJNA841977

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE204698_RAW.tar 88.1 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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