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| Status |
Public on Aug 01, 2022 |
| Title |
Modeling human extraembryonic mesoderm cells using naive pluripotent stem cells [scRNA_seq_timecourse_naiveTSC] |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
time course scRNAseq of naïve to trophoblast stem cells and extraembryonic mesoderm conversion and D70 sorted extraembryonic mesoderm. Samples were collected at day 0, 1, 2, 4, 8, 13 and 18.
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| Overall design |
time course scRNAseq of naïve to trophoblast stem cells and extraembryonic mesoderm conversion and D70 sorted extraembryonic mesoderm. Samples were collected at day 0, 1, 2, 4, 8, 13 and 18.
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| Contributor(s) |
Pham TX, Panda A, Kagawa H, Georgolopoulos G, Bruneau A, Allsop RN, To S, Janiszewski A, Oberhuemer M, Tchinda RS, Lluis F, David L, Rivron N, Balaton BP, Pasque V |
| Citation(s) |
36055191 |
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| Submission date |
May 25, 2022 |
| Last update date |
Mar 03, 2024 |
| Contact name |
Vincent Pasque |
| E-mail(s) |
vincent.pasque@kuleuven.be
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| Organization name |
KU Leuven
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| Department |
Development and Regeneration
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| Street address |
Herestraat 49 bus 804
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| City |
Leuven |
| ZIP/Postal code |
3000 |
| Country |
Belgium |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (8)
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| This SubSeries is part of SuperSeries: |
| GSE191286 |
Modeling human extraembryonic mesoderm cells using naive pluripotent stem cells |
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| Relations |
| BioProject |
PRJNA842268 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE204779_Messmer_Pet_Zhou_Xiang_Tyser_VPD30_VPtimecourse_seurat_obj.loom.gz |
435.6 Mb |
(ftp)(http) |
LOOM |
| GSE204779_scRNA_seq_timecourse_naiveTSC_annotation.csv.gz |
199.3 Kb |
(ftp)(http) |
CSV |
| GSE204779_scRNA_seq_timecourse_naiveTSC_count_matrix.csv.gz |
48.1 Mb |
(ftp)(http) |
CSV |
| GSE204779_timecourse_naive2TSC_EXMC_seurat_obj.loom.gz |
108.3 Mb |
(ftp)(http) |
LOOM |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data are available on Series record |
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