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Series GSE20585 Query DataSets for GSE20585
Status Public on May 27, 2010
Title The mutation spectrum revealed by paired genome sequences from a lung cancer patient
Organism Homo sapiens
Experiment type Genome variation profiling by genome tiling array
Genome variation profiling by SNP array
Expression profiling by array
Summary This SuperSeries is composed of the SubSeries listed below.
Overall design Refer to individual Series
Citation(s) 20505728
Submission date Mar 02, 2010
Last update date Mar 25, 2019
Contact name Peter Haverty
Organization name Genentech, Inc.
Department Bioinformatics
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
Platforms (3)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
GPL6801 [GenomeWideSNP_6] Affymetrix Genome-Wide Human SNP 6.0 Array
GPL9128 Agilent-014693 Human Genome CGH Microarray 244A (Probe name version)
Samples (5)
GSM517034 HF-23896-(1), Agilent
GSM517057 HF-23896-(1), Affymetrix HG-U133 plus 2.0 array
GSM517058 HF-23897-(1), Affymetrix HG-U133 plus 2.0 array
This SuperSeries is composed of the following SubSeries:
GSE20574 Agilent 244A aCGH array for comparison of lung tumor CNA to high-throughput sequencing data
GSE20578 Assessment of mutation on expression levels
GSE20584 Affymetrix SNP6.0 array for comparison of lung tumor and adjacent normal to high-throughput sequencing data
BioProject PRJNA125281

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE20585_RAW.tar 189.4 Mb (http)(custom) TAR (of CEL, TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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