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Series GSE206619 Query DataSets for GSE206619
Status Public on Mar 19, 2023
Title Comprehensive characterization of hepatic inflammatory changes in a mouse model of alpha-1 antitrypsin deficiency
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary In this study, we sought to thoroughly characterize the liver pathophysiology of a human transgenic mouse model for alpha-1 antitrypsin deficiency (AATD) with a strong manifestation of AATD-mediated liver disease. Male and female transgenic mice for normal variant human alpha-1 antitrypsin (Pi*M) and mutant human alpha-1 antitrypsin (Pi*Z) at 3 and 6 months of age with a C57BL/6J background were subjected to study. The progression of hepatic accumulation of mutant alpha-1 antitrypsin (ZAAT), hepatocyte injury, steatosis, liver inflammation and fibrotic features of this mouse model were monitored by performing an in vivo study.
 
Overall design This study was performed with approval from the University of Florida Institutional Animal Care and Use Committee with strict adherence to the Guide for Care and Use of Laboratory Animals (NIH, 86-23). Transgenic Pi*Z and Pi*M were maintained on a C57BL/6J background. Mice were provided food, water and 12:12 hour dark:light cycles in a barrier facility. Intraperitoneal injection of lipopolysaccharide (LPS, InvivoGen, San Diego, CA) at a dose of 0.5ug LPS/g of body mass was performed 16 hours prior to euthanasia.
 
Contributor(s) Khodayari N
Citation(s) 36256438
Submission date Jun 22, 2022
Last update date Mar 20, 2023
Contact name Tongjun Gu
E-mail(s) tgu@ufl.edu
Organization name The University of Florida
Department ICBR
Street address 2033 Mowry Road
City Gainesville
State/province FL
ZIP/Postal code 32610
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (12)
GSM6258231 S-890849
GSM6258232 S-894411
GSM6258233 S-898353
Relations
BioProject PRJNA851584

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE206619_RAW.tar 11.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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