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GEO accession:
Series GSE207071
Query DataSets for GSE207071
Status
Public on Dec 01, 2023
Title
Transcriptome and chromatin changes during CRC organoid outgrowth as proxy for metastatic outgrowth
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation missing
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Submission date
Jun 28, 2022
Last update date
Dec 01, 2023
Contact name
Maria Christine Heinz
E-mail(s)
Maria.Puschhof@uni-heidelberg.de
Organization name
University Medical Center Utrecht
Department
Molecular Cancer Research
Lab
Hugo Snippert
Street address
Heidelberglaan 100
City
Utrecht
ZIP/Postal code
3584 CX
Country
Netherlands
Platforms (1)
GPL18573
Illumina NextSeq 500 (Homo sapiens)
Samples (53)
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More...
GSM6276669
ATAC_AKPS_Day5_STAR-neg-to-neg_1
GSM6276670
ATAC_AKPS_Day5_STAR-neg-to-pos_1
GSM6276671
ATAC_AKPS_Day5_STAR-neg-to-pos_2
GSM6276672
ATAC_AKPS_Day5_STAR-pos-to-neg_1
GSM6276673
ATAC_AKPS_Day5_STAR-pos-to-neg_2
GSM6276674
ATAC_AKPS_Day5_STAR-pos-to-neg_3
GSM6276675
ATAC_AKPS_Day5_STAR-pos-to-pos_1
GSM6276676
ATAC_AKPS_Day5_STAR-pos-to-pos_2
GSM6276677
ATAC_AKPS_Day5_STAR-pos-to-pos_3
GSM6276678
ATAC_AKPS_Day12_STAR-neg-to-neg_1
GSM6276679
ATAC_AKPS_Day12_STAR-neg-to-neg_2
GSM6276680
ATAC_AKPS_Day12_STAR-neg-to-neg_3
GSM6276681
ATAC_AKPS_Day12_STAR-neg-to-pos_1
GSM6276682
ATAC_AKPS_Day12_STAR-neg-to-pos_2
GSM6276683
ATAC_AKPS_Day12_STAR-neg-to-pos_3
GSM6276684
ATAC_AKPS_Day12_STAR-pos-to-neg_1
GSM6276685
ATAC_AKPS_Day12_STAR-pos-to-neg_2
GSM6276686
ATAC_AKPS_Day12_STAR-pos-to-neg_3
GSM6276687
ATAC_AKPS_Day12_STAR-pos-to-pos_1
GSM6276688
ATAC_AKPS_Day12_STAR-pos-to-pos_2
GSM6276689
ATAC_AKPS_Day12_STAR-pos-to-pos_3
GSM6276690
RNA_AKPS_Day5_STAR-neg-to-neg_1
GSM6276691
RNA_AKPS_Day5_STAR-neg-to-pos_1
GSM6276692
RNA_AKPS_Day5_STAR-neg-to-pos_2
GSM6276693
RNA_AKPS_Day5_STAR-pos-to-neg_1
GSM6276694
RNA_AKPS_Day5_STAR-pos-to-neg_2
GSM6276695
RNA_AKPS_Day5_STAR-pos-to-neg_3
GSM6276696
RNA_AKPS_Day5_STAR-pos-to-pos_1
GSM6276697
RNA_AKPS_Day5_STAR-pos-to-pos_2
GSM6276698
RNA_AKPS_Day5_STAR-pos-to-pos_3
GSM6276699
RNA_AKPS_Day12_STAR-neg-to-neg_1
GSM6276700
RNA_AKPS_Day12_STAR-neg-to-neg_2
GSM6276701
RNA_AKPS_Day12_STAR-neg-to-neg_3
GSM6276702
RNA_AKPS_Day12_STAR-neg-to-pos_1
GSM6276703
RNA_AKPS_Day12_STAR-neg-to-pos_2
GSM6276704
RNA_AKPS_Day12_STAR-neg-to-pos_3
GSM6276705
RNA_AKPS_Day12_STAR-pos-to-neg_1
GSM6276706
RNA_AKPS_Day12_STAR-pos-to-neg_2
GSM6276707
RNA_AKPS_Day12_STAR-pos-to-neg_3
GSM6276708
RNA_AKPS_Day12_STAR-pos-to-pos_1
GSM6276709
RNA_AKPS_Day12_STAR-pos-to-pos_2
GSM6276710
RNA_AKPS_Day12_STAR-pos-to-pos_3
GSM6276711
RNA_AKP_Day5_STAR-pos-to-neg_1
GSM6276712
RNA_AKP_Day5_STAR-pos-to-neg_2
GSM6276713
RNA_AKP_Day5_STAR-pos-to-neg_3
GSM6276714
RNA_AKP_Day5_STAR-pos-to-pos_1
GSM6276715
RNA_AKP_Day5_STAR-pos-to-pos_2
GSM6276716
RNA_AKP_Day5_STAR-pos-to-pos_3
GSM6276717
RNA_AKP_Day12_STAR-pos-to-neg_1
GSM6276718
RNA_AKP_Day12_STAR-pos-to-neg_2
GSM6276719
RNA_AKP_Day12_STAR-pos-to-pos_1
GSM6276720
RNA_AKP_Day12_STAR-pos-to-pos_2
GSM6276721
RNA_AKP_Day12_STAR-pos-to-pos_3
This SuperSeries is composed of the following SubSeries:
GSE207068
Transcriptome and chromatin changes during CRC organoid outgrowth as proxy for metastatic outgrowth [bulkATACseq_AKPS]
GSE207069
Transcriptome and chromatin changes during CRC organoid outgrowth as proxy for metastatic outgrowth [bulkRNAseq_AKPS]
GSE207070
Transcriptome and chromatin changes during CRC organoid outgrowth as proxy for metastatic outgrowth [bulkRNAseq_AKP]
Relations
BioProject
PRJNA853548
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE207071_RAW.tar
4.6 Mb
(http)
(custom)
TAR (of TXT)
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