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Series GSE207497 Query DataSets for GSE207497
Status Public on Jul 29, 2022
Title Effects of two-component system NarQ/P deletion on gene expression of Actinobacillus pleuropneumoniae in nitrate-rich anaerobic growth
Organism Actinobacillus pleuropneumoniae serovar 1 str. 4074
Experiment type Expression profiling by high throughput sequencing
Summary Nitrate metabolism is an adaptation mechanism used by many bacteria for survival under anaerobic environments. As a by-product of inflammation, nitrate is used by the intestinal bacterial pathogens to enable gut infection. However, the responses of bacterial respiratory pathogens to nitrate are less well understood. Actinobacillus pleuropneumoniae is an important bacterial respiratory pathogen of swine. Previous studies have suggested that adaptation of A. pleuropneumoniae to anaerobiosis is important for infection. In this work, A. pleuropneumoniae growth and pathogenesis in response to the nitrate were investigated. Nitrate significantly promoted A. pleuropneumoniae growth under anaerobic condition in vitro and lethality in mice. By using narQ and narP deletion mutants, and single-residue mutation complementary strains of ΔnarQ, the two-component system NarQ/P were confirmed to be critical for nitrate induced growth, with Arg50 in NarQ as an essential functional residue. Transcriptome analysis showed that nitrate up-regulated multiple energy-generating pathways, including nitrate metabolism, mannose and pentose metabolism and glycerolipid metabolism via the regulation of NarQ/P. Furthermore, narQ, narP and its target gene encoding the nitrate reductase Nap contributed to the pathogenicity of A. pleuropneumoniae. The Nap inhibitor tungstate significantly reduced the survival of A. pleuropneumoniae in vivo, suggesting that Nap is a potential drug target. These results give new insights into how the respiratory pathogen A. pleuropneumoniae utilizes alternative electron acceptor nitrate to overcome the hypoxia microenvironment, which can occur in the inflammatory or necrotic infected tissues.
 
Overall design Comparative gene expression profile analysis of RNA-seq data of Actinobacillus pleuropneumoniae serovar 1 str. 4074 wild type strain and deletion strains (ΔnarP, ΔnarQ) in anaerobic culture and anaerobic culture supplemented with 5mM nitrate, respectively
 
Contributor(s) Zhang Q, Li L
Citation(s) 35938858
Submission date Jul 05, 2022
Last update date Oct 29, 2022
Contact name Qiuhong Zhang
E-mail(s) zhangqiuhong@webmail.hzau.edu.cn
Phone 13297978781
Organization name Huazhong Agricultural University
Street address No. 1, Shizishan Street
City Wuhan
ZIP/Postal code 430070
Country China
 
Platforms (1)
GPL32420 Illumina NextSeq 500 (Actinobacillus pleuropneumoniae serovar 1 str. 4074)
Samples (18)
GSM6290597 WT rep1
GSM6290598 WT rep2
GSM6290599 WT rep3
Relations
BioProject PRJNA855927

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Supplementary file Size Download File type/resource
GSE207497_Expression.xlsx 1.1 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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