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Series GSE210062 Query DataSets for GSE210062
Status Public on Aug 01, 2022
Title Global Profiling of Histone Modifications in Plasmodium falciparum using CUT&RUN.
Organism Plasmodium falciparum
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Third-party reanalysis
Summary Global Profiling of Histone Modifications in Plasmodium falciparum using CUT&RUN.
 
Overall design CUT&RUN

This series includes re-analysis of SRR4444647, SRR4444639, SRR5935737, SRR5935738, SRR065659 and SRR065664.
 
Contributor(s) Campelo Morillo RA, Harris CT, Kennedy K, Kafsack BF
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date Jul 29, 2022
Last update date Oct 12, 2022
Contact name Bjorn FC Kafsack
Organization name Weill Cornell Medicine
Department Microbiology & Immunology
Street address 1300 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platforms (1)
GPL21298 Illumina NextSeq 500 (Plasmodium falciparum)
Samples (9)
GSM6416011 Sample 1 Isotype CUT&RUN
GSM6416012 Sample 1 H3K9me3 CUT&RUN
GSM6416013 Sample 1 H3K4me3 CUT&RUN
Relations
BioProject PRJNA863601

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE210062_H3K4me3_ChIP.bw 135.9 Mb (ftp)(http) BW
GSE210062_H3K9me3_ChIP.bw 76.3 Mb (ftp)(http) BW
GSE210062_RAW.tar 290.6 Mb (http)(custom) TAR (of BW)
GSE210062_reanalyzed_sample_description.txt.gz 243 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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