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Series GSE210828 Query DataSets for GSE210828
Status Public on Aug 11, 2022
Title The Human UPAT and the Arabidopsis APOLO lncRNA regulated a comparable set of genes in Arabidopsis
Organism Arabidopsis thaliana
Experiment type Expression profiling by high throughput sequencing
Summary The overexpression of the Arabidopsis APOLO lncRNA or the human UPAT lncRNA in Arabidopsis seedlings show a significant overlap between APOLO and UPAT deregulated genes, strongly suggesting they exert similar molecular mechanisms.
Overall design 4-day-old Col, 35S:APOLO or 35S:UPAT seedlings growing at 23°C were analyzed for RNA-Seq in triplicates
Contributor(s) Fonouni-Farde C, Christ A, Blein T, Ariel F
Citation(s) 36038910
Submission date Aug 09, 2022
Last update date Sep 15, 2022
Contact name Thomas Blein
Organization name CNRS
Lab IPS2
Street address rue de Noetzlin
City Gif-sur-Yvette
ZIP/Postal code 91190
Country France
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (9)
GSM6438998 WT_A
GSM6438999 WT_B
GSM6439000 WT_C
BioProject PRJNA867685

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE210828_RAW.tar 2.0 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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