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Series GSE212526 Query DataSets for GSE212526
Status Public on Dec 12, 2023
Title Spatial transcriptomics analysis of soft tissue sarcomas.
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary The tumor microenvironment plays a crucial role in soft tissue sarcoma development and response to therapy. We used spatial transcriptomics to analyze the spatial distribution of malignant, immune, and other stromal cells present within soft tissue sarcomas.
 
Overall design Spatial transcriptomics was performed on 4 soft tissue sarcomas.
Web link http://10.1038/s43018-024-00743-y
 
Contributor(s) Moding E, Subramanian A
Citation(s) 38429415
Submission date Sep 01, 2022
Last update date Mar 13, 2024
Contact name Ajay Subramanian
E-mail(s) ajayss@stanford.edu
Organization name Stanford University School of Medicine
Department Radiation Oncology
Lab Moding Lab
Street address 450 Serra Mall
City Stanford
State/province CA
ZIP/Postal code 94305
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM6534007 SRC106
GSM6534008 SRC107
GSM6534009 SRC93
Relations
BioProject PRJNA875908

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE212526_HE_position_files.zip 1.1 Gb (ftp)(http) ZIP
GSE212526_RAW.tar 71.3 Mb (http)(custom) TAR (of CSV, JPG, JSON, MTX, PNG, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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