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| Status |
Public on Apr 07, 2023 |
| Title |
Gene expression profile of Arabidopsis root tip cells exposed to 2 hours of 50µM jasmonate |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We used single cell RNA sequencing (scRNA-seq) to analyze the response to jasmonate treatment in root tips at the single cell level.
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| Overall design |
protoplast were generated from root tips then cells were isolated by Fluorescence-activated cell sorting (FACS) according to the presence or absence of DAPI signal and analyzed using scRNAseq.
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| Contributor(s) |
Ritter A, Goossens A |
| Citation missing |
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| |
| Submission date |
Sep 07, 2022 |
| Last update date |
Apr 09, 2023 |
| Contact name |
Jana Roels |
| E-mail(s) |
jana.roels@vib.be, niels.vandamme@vib.be
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| Organization name |
VIB
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| Department |
VIB Single cell core
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| Street address |
Technologiepark-Zwijnaarde 71
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| City |
Zwijnaarde |
| ZIP/Postal code |
9052 |
| Country |
Belgium |
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| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
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| Samples (1) |
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| Relations |
| BioProject |
PRJNA877588 |
