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Status |
Public on Oct 07, 2010 |
Title |
Protein arginine methyltransferase AtPRMT5 is involved in pre-mRNA splicing in Arabidopsis thaliana |
Organism |
Arabidopsis thaliana |
Experiment type |
Expression profiling by high throughput sequencing
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Summary |
In this study, we analyzed the Arabidopsis homologue of PRMT5, AtPRMT5’s function in RNA processing. RNA-seq analyses revealed that AtPRMT5 is involved in a subset of pre-mRNA splicing. Several RNA processing factors involved in regulating flowering time were validated that the corresponding intron retention surely exists in atprmt5 mutants. AtSm proteins can also be methylated by AtPRMT5 in vitro and in vivo, which may be the reasons for the pre-mRNA splicing defects in atprmt5.
Contributed by The Institute of Genetics and Developmental Biology (IGDB) of the Chinese Academy of Sciences
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Overall design |
Investigate the role of AtPRMT5 in pre-mRNA splicing
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Contributor(s) |
Deng X, Gu L, Liu C, Lu T, Lu F, Lu Z, Cui P, Pei Y, Wang B, Hu S, Cao X |
Citation(s) |
20956294 |
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Submission date |
Apr 13, 2010 |
Last update date |
May 15, 2019 |
Contact name |
xiaofeng cao |
E-mail(s) |
xfcao@genetics.ac.cn
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Phone |
86-10-64869203
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Organization name |
Institute of Genetics and Developmental Biology
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Department |
State Key Laboratory of Plant Genomics
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Street address |
West Lincui Road, Chaoyang District
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City |
Beijing |
ZIP/Postal code |
100101 |
Country |
China |
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Platforms (1) |
GPL10272 |
AB SOLiD System 2.0 (Arabidopsis thaliana) |
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Samples (2) |
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Relations |
SRA |
SRP002301 |
BioProject |
PRJNA126167 |