|
| Status |
Public on Jul 06, 2010 |
| Title |
DeepCAGE and DeepSAGE with proliferating and differentiated C2C12 mouse myoblasts |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
We use tag-based next generation sequencing analysis to quantify gene expression levels during myogenic differentiation and focused on the identifcation of novel 3' ends with DeepSAGE and novel 5' ends with DeepCAGE.
|
| |
|
| Overall design |
Illumina DeepCAGE and DeepSAGE with C2C12 cells at time points T0 (proliferating) and T9 (differentiated) days of differentiation.
|
| |
|
| Contributor(s) |
Hestand MS, 't Hoen PA |
| Citation(s) |
20615900 |
| |
| Submission date |
Apr 28, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Peter A.C. 't Hoen |
| E-mail(s) |
p.a.c.hoen@lumc.nl
|
| Phone |
+31 71 5269421
|
| Fax |
+31 71 5268285
|
| URL |
http://www.humgen.nl
|
| Organization name |
Leiden University Medical Center
|
| Department |
Center for Human and Clinical Genetics
|
| Street address |
PO Box 9600
|
| City |
Leiden |
| ZIP/Postal code |
2300 RC |
| Country |
Netherlands |
| |
|
| Platforms (1) |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
|
| Samples (14)
|
|
| Relations |
| SRA |
SRP002400 |
| BioProject |
PRJNA127015 |
Less...
More...