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Series GSE21580 Query DataSets for GSE21580
Status Public on Jul 06, 2010
Title DeepCAGE and DeepSAGE with proliferating and differentiated C2C12 mouse myoblasts
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We use tag-based next generation sequencing analysis to quantify gene expression levels during myogenic differentiation and focused on the identifcation of novel 3' ends with DeepSAGE and novel 5' ends with DeepCAGE.
Overall design Illumina DeepCAGE and DeepSAGE with C2C12 cells at time points T0 (proliferating) and T9 (differentiated) days of differentiation.
Contributor(s) Hestand MS, 't Hoen PA
Citation(s) 20615900
Submission date Apr 28, 2010
Last update date May 15, 2019
Contact name Peter A.C. 't Hoen
Phone +31 71 5269421
Fax +31 71 5268285
Organization name Leiden University Medical Center
Department Center for Human and Clinical Genetics
Street address PO Box 9600
City Leiden
ZIP/Postal code 2300 RC
Country Netherlands
Platforms (1)
GPL9250 Illumina Genome Analyzer II (Mus musculus)
Samples (14)
GSM538826 SAGE_T0-1
GSM538827 SAGE_T0-2
GSM538828 SAGE_T0-3
SRA SRP002400
BioProject PRJNA127015

Download family Format
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Supplementary file Size Download File type/resource
GSE21580_RAW.tar 233.2 Mb (http)(custom) TAR (of WIG)
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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