|
| Status |
Public on May 05, 2010 |
| Title |
Expression differences between inversions and their progenitors in Drosophila melanogaster embryos |
| Organism |
Drosophila melanogaster |
| Experiment type |
Genome variation profiling by array
|
| Summary |
Inversions have a breakpoint within a "neighbourhood" of embryonically expressed genes and the other breakpoint megabases away. The gene expression neighbourhood is therefore intact in the progenitor but disrupted in the inversion.
|
| |
|
| Overall design |
1 progenitor stock and 1 inversion stock, 4 biological replicates for each, including 2 dye swaps.
|
| |
|
| Contributor(s) |
Meadows LA, Russell S |
| Citation(s) |
21151342 |
| |
| Submission date |
Apr 30, 2010 |
| Last update date |
Jul 10, 2013 |
| Contact name |
Lisa Meadows |
| E-mail(s) |
l.meadows@gen.cam.ac.uk
|
| Organization name |
University of Cambridge
|
| Department |
Department of Genetics
|
| Lab |
FlyChip
|
| Street address |
Downing Street
|
| City |
Cambridge |
| ZIP/Postal code |
CB2 3EH |
| Country |
United Kingdom |
| |
|
| Platforms (1) |
| GPL8244 |
FL003 - INDAC Drosophila melanogaster 14.5K long oligo array |
|
| Samples (4)
|
| GSM539383 |
embryo inversion EIn(1)103.8 vs progenitor cis103.8 replicate 1 |
| GSM539384 |
embryo inversion EIn(1)103.8 vs progenitor cis103.8 replicate 2 dye swap |
| GSM539385 |
embryo inversion EIn(1)103.8 vs progenitor cis103.8 replicate 3 |
| GSM539386 |
embryo inversion EIn(1)103.8 vs progenitor cis103.8 replicate 4 dye swap |
|
| Relations |
| BioProject |
PRJNA126979 |
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