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Status |
Public on Mar 19, 2023 |
Title |
The study of SWI/SNF subunits and other transcription factors deposition in asynchronous and mitotic mESCs and cells released from mitosis II |
Organism |
Mus musculus |
Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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Summary |
We conduct ATAC-seq in SMARCE1 MD/MD(R42A) after mitotic release 90 min in either DMSO treated or BRG1 inhibitor BRM014 treated conditions
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Overall design |
Examination of chromatin accessibility in mitotically degraded SMARCE1 and control on either DMSO or BRG1 inhibitor BRM014 treated ES cells.
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Contributor(s) |
ZHU Z, CHEN X |
Citation(s) |
37225980 |
Submission date |
Oct 26, 2022 |
Last update date |
Jun 02, 2023 |
Contact name |
Zhexin Zhu |
E-mail(s) |
zhexin.zhu@gmail.com
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Organization name |
St Jude Children's Research Hospital
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Street address |
262 Danny Thomas Pl
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City |
Memphis |
ZIP/Postal code |
38105 |
Country |
USA |
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Platforms (1) |
GPL24247 |
Illumina NovaSeq 6000 (Mus musculus) |
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Samples (8)
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GSM6685362 |
Smarce1 - MD (R42A) DMSO release 90min ATAC rep1 |
GSM6685363 |
Smarce1 - MD (R42A) DMSO release 90min ATAC rep2 |
GSM6685364 |
Smarce1 - MD DMSO release 90min ATAC rep1 |
GSM6685365 |
Smarce1 - MD DMSO release 90min ATAC rep2 |
GSM6685366 |
Smarce1 - MD (R42A) BRM014 release 90min ATAC rep1 |
GSM6685367 |
Smarce1 - MD (R42A) BRM014 release 90min ATAC rep2 |
GSM6685368 |
Smarce1 - MD BRM014 release 90min ATAC rep1 |
GSM6685369 |
Smarce1 - MD BRM014 release 90min ATAC rep2 |
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This SubSeries is part of SuperSeries: |
GSE189563 |
Mitotic bookmarking by SWI/SNF subunits |
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Relations |
BioProject |
PRJNA894697 |