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Series GSE216671 Query DataSets for GSE216671
Status Public on Jun 07, 2023
Title RNA-seq of T cell with/without lycorine treatment in vitro and RNA-seq of T cell in spleen and allograft
Organisms Homo sapiens; Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary To examine the transcriptomic changes of T cells in response to lycorine, and to compare the transcriptomic changes in spleen T cell and allograft-infiltrating T cell.
Overall design In vitro experiment, we stimulated mice or human T cells with anti-CD3/anti-CD28 in the presence/absence of lycorine. In vivo experiment, we purified CD4+ and CD8+ T cell from spleen and allograft.
Contributor(s) Tan X, Chen G
Citation(s) 37013935
Submission date Oct 27, 2022
Last update date Jun 07, 2023
Contact name Xiaosheng Tan
Phone 13871387473
Organization name Huazhong university of science and technology
Street address #1095, Jiefang Avenu
City Wuhan
ZIP/Postal code 430030
Country China
Platforms (2)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
GPL28330 DNBSEQ-T7 (Mus musculus)
Samples (26)
GSM6685565 in vitro, control splenic CD4+ T, 1
GSM6685566 in vitro, control splenic CD4+ T, 2
GSM6685567 in vitro, lycorine treated splenic CD4+ T, 1
BioProject PRJNA894866

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE216671_HUMAN_All_samples_rpkm.txt.gz 6.5 Mb (ftp)(http) TXT
GSE216671_IN_VITRO_All_samples_rpkm.txt.gz 436.3 Kb (ftp)(http) TXT
GSE216671_IN_VIVO_All_samples_rpkm.txt.gz 588.6 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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