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Series GSE217054 Query DataSets for GSE217054
Status Public on Nov 02, 2022
Title An avb3 integrin checkpoint is critical for efficient TH2 cytokine polarisation and potentiating antigen-specific immunity [ChIP-seq]
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary To investigate the role of avb3 integrin in TH2 immunity.
We performed gene expression profiling analysis using control vs av-KO TH cells.
 
Overall design ChIP-seq using anti-Gata3 antibody.
 
Contributor(s) Szeto AC, Ferreira AC, Mannion J, Clark PA, Sivasubramaniam M, Heycock MW, Crisp A, Jolin HE, Kozik P, Knolle MD, McKenzie AN
Citation(s) 36550322
Submission date Nov 01, 2022
Last update date Jan 13, 2023
Contact name Alastair Crisp
Organization name MRC Laboratory of Molecular Biology
Street address Francis Crick Avenue
City Cambridge
ZIP/Postal code CB2 0QH
Country United Kingdom
 
Platforms (1)
GPL21103 Illumina HiSeq 4000 (Mus musculus)
Samples (2)
GSM6704266 Gata3-ChIPseq_1
GSM6704267 Gata3-ChIPseq_2
This SubSeries is part of SuperSeries:
GSE179210 Genome-wide CRISPR screen reveals a key role for integrin avb3 in TH2 cell polarisation.
Relations
BioProject PRJNA896639

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE217054_RAW.tar 971.3 Mb (http)(custom) TAR (of BED, XLSX)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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