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Series GSE217731 Query DataSets for GSE217731
Status Public on Sep 11, 2023
Title Association of frequent hypermethylation with high grade histological subtype in lung adenocarcinoma. (Infinium MethylationEPIC)
Organism Homo sapiens
Experiment type Methylation profiling by genome tiling array
Summary Comprehensive DNA methylation analysis of each histological LUAD subtype. Infinium MethylationEPIC BeadChip was used to obtain DNA methylation profiles across 850,000 CpG sites. Samples included 4 Micropapillary subtype, 5 Acinar subtype, 5 Solid subype.
 
Overall design Bisulphite converted DNA from the 14 samples were hybridized to the Infinium MethylationEPIC BeadChip.
 
Contributor(s) Ito Y, Usui G, Matsusaka K, Fukuyo M, Sata Y, Morimoto J, Yoshino I, Kaneda A
Citation(s) 37082886
Submission date Nov 10, 2022
Last update date Sep 12, 2023
Contact name Masaki Fukuyo
E-mail(s) fukuyo@chiba-u.jp
Organization name Chiba University
Department Department of Molecular Oncology
Street address 1-8-1 Inohana, Chuo-ku
City Chiba
ZIP/Postal code 260-8670
Country Japan
 
Platforms (1)
GPL21145 Infinium MethylationEPIC
Samples (14)
GSM6725559 genomic DNA from MPP07_LC_FrozenTissue
GSM6725560 genomic DNA from MPP09_LC_FrozenTissue
GSM6725561 genomic DNA from MPP11_LC_FrozenTissue
This SubSeries is part of SuperSeries:
GSE217733 Association of frequent hypermethylation with high grade histological subtype in lung adenocarcinoma
Relations
BioProject PRJNA900238

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE217731_RAW.tar 161.2 Mb (http)(custom) TAR
GSE217731_signals.txt.gz 58.3 Mb (ftp)(http) TXT
Processed data included within Sample table

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