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Series GSE21814 Query DataSets for GSE21814
Status Public on Jan 05, 2011
Title γH2A is a component of yeast heterochromatin required for telomere elongation
Organism Saccharomyces cerevisiae
Experiment type Genome binding/occupancy profiling by genome tiling array
Summary Histones of heterochromatin are deacetylated in yeast and methylated in more complex eukaryotes to regulate heterochromatin structure and gene silencing. Here, we report that histone H2A phosphorylated at serine 129 (γH2A) in Saccharomyces cerevisiae is a conceptually new type of heterochromatin modification that functions downstream of silent chromatin assembly. We show that γH2A is enriched throughout yeast telomeric and silent mating locus (HM) heterochromatin where γH2A results from the action of kinases Tel1 and Mec1. Interestingly, mutation of γH2A has no apparent effect on the binding of Sir (silent information regulator) complex or on gene silencing. In contrast, deletion of SIR3 abolishes the formation of γH2A at heterochromatin. To address the function of γH2A, we used a ∆rif1 mutant strain in which telomeres are excessively elongated to show that γH2A is required for the optimal recruitment of Cdc13, a regulator of telomere elongation, and for telomere elongation itself. Thus, a histone modification that parallels Sir3 protein binding is shown here to be dispensable for the formation of a silent structure but is important for a crucial heterochromatin-specific downstream function in telomere homeostasis.
 
Overall design gamma-H2A and RNA polymerase II ChIP vs. INPUT in YDS2.
 
Contributor(s) Kitada T, Schleker T, Sperling AS, Xie W, Gasser SM, Grunstein M
Citation(s) 21212735
Submission date May 13, 2010
Last update date Jan 09, 2016
Contact name Tasuku Kitada
Organization name University of California, Los Angeles
Street address 611 Charles E Young Dr East
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (2)
GPL7249 [Sc03b_MF] Affymetrix GeneChip S. cerevisiae Tiling 1.0F Array
GPL7250 [Sc03b_MR] Affymetrix GeneChip S. cerevisiae Tiling 1.0R Array
Samples (9)
GSM543114 gH2A
GSM543115 INPUT_1
GSM543116 INPUT_2
Relations
BioProject PRJNA127257

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE21814_RAW.tar 322.9 Mb (http)(custom) TAR (of BAR, CEL)
Processed data provided as supplementary file

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