|
| Status |
Public on Jun 07, 2023 |
| Title |
Contribution of 6mer seed toxicity to HIV-1 induced cytotoxicity [DISE-36] |
| Organism |
Homo sapiens |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
Other
|
| Summary |
Analysis of RISC bound short (s)RNAs in cells infected with HIV-1 reveals a contribution of 6mer seed toxicity to HIV-1 induced cytopathicity
|
| |
|
| Overall design |
Ago protein associated short RNAs were pulled down using a GW182 peptide and subjected to smRNA Seq
|
| |
|
| Contributor(s) |
Bartom E, Peter M, Vaidyanathan A |
| Citation(s) |
37310263 |
| |
| Submission date |
Nov 17, 2022 |
| Last update date |
Sep 06, 2023 |
| Contact name |
Marcus Peter |
| E-mail(s) |
m-peter@northwestern.edu
|
| Organization name |
Northwestern University Feinberg School of Medicine
|
| Street address |
303 East Superior Street, Lurie 6-123
|
| City |
Chicago |
| State/province |
IL |
| ZIP/Postal code |
60611 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
|
| Samples (8)
|
|
| This SubSeries is part of SuperSeries: |
| GSE218195 |
Contribution of 6mer seed toxicity to HIV-1 induced cytotoxicity |
|
| Relations |
| BioProject |
PRJNA902715 |
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