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Status |
Public on Jun 07, 2023 |
Title |
Contribution of 6mer seed toxicity to HIV-1 induced cytotoxicity (DISE-45) |
Organism |
Homo sapiens |
Experiment type |
Non-coding RNA profiling by high throughput sequencing Other
|
Summary |
Analysis of RISC bound short (s)RNAs in cells infected with HIV-1 reveals a contribution of 6mer seed toxicity to HIV-1 induced cytopathicity
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Overall design |
Ago protein associated short RNAs were pulled down using a GW182 peptide and subjected to smRNA Seq
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Contributor(s) |
Bartom E, Peter M, Vaidyanathan A |
Citation(s) |
37310263 |
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Submission date |
Nov 17, 2022 |
Last update date |
Sep 06, 2023 |
Contact name |
Marcus Peter |
E-mail(s) |
m-peter@northwestern.edu
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Organization name |
Northwestern University Feinberg School of Medicine
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Street address |
303 East Superior Street, Lurie 6-123
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City |
Chicago |
State/province |
IL |
ZIP/Postal code |
60611 |
Country |
USA |
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Platforms (1) |
GPL20301 |
Illumina HiSeq 4000 (Homo sapiens) |
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Samples (12)
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This SubSeries is part of SuperSeries: |
GSE218195 |
Contribution of 6mer seed toxicity to HIV-1 induced cytotoxicity |
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Relations |
BioProject |
PRJNA902716 |