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Series GSE218194 Query DataSets for GSE218194
Status Public on Jun 07, 2023
Title Contribution of 6mer seed toxicity to HIV-1 induced cytotoxicity (DISE-69)
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Analysis of total RNA by RNA seq
 
Overall design Samples of HCT116 cells transfected with NC1 and miRNA HIV-miR-TAR-3p
 
Contributor(s) Bartom E, Peter M, Vaidyanathan A
Citation(s) 37310263
Submission date Nov 17, 2022
Last update date Sep 06, 2023
Contact name Marcus Peter
E-mail(s) m-peter@northwestern.edu
Organization name Northwestern University Feinberg School of Medicine
Street address 303 East Superior Street, Lurie 6-123
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (4)
GSM6736363 AV HCT116 NC1-1
GSM6736364 AV HCT116 NC1-2
GSM6736365 AV HCT116 miRTar3p-1
This SubSeries is part of SuperSeries:
GSE218195 Contribution of 6mer seed toxicity to HIV-1 induced cytotoxicity
Relations
BioProject PRJNA902718

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218194_AV_HCT116_NC1_vs_AV_HCT116_miRTar3p_Differential_Expression.xlsx 5.8 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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