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| Status |
Public on Aug 06, 2023 |
| Title |
ChIP-seq analysis of E2FA, E2FB, E2FC and RBR targets |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
The goal of the experiment was to identify and compare at the genome-wide level the targets of E2FA, E2FB and E2FC, the three canonical E2Fs, and those of their binding partner RBR.
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| Overall design |
For each protein a transgenic line expressing a GFP fusion of the protein under the control of the native promoter was obtained. One replicate was produced for each experiment
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| Contributor(s) |
Chaouche RB, He X, Latrasse D, An J, Benhamed M, Raynaud C |
| Citation(s) |
37666980 |
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| Submission date |
Nov 21, 2022 |
| Last update date |
Sep 15, 2023 |
| Contact name |
Xiaoning HE |
| E-mail(s) |
xiaoninghe6@gmail.com
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| Organization name |
universite-paris-saclay
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| Street address |
630,Rue Noetzlin
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| City |
Gif Sur Yvette |
| ZIP/Postal code |
91190 |
| Country |
France |
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| Platforms (1) |
| GPL19580 |
Illumina NextSeq 500 (Arabidopsis thaliana) |
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| Samples (7)
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| Relations |
| BioProject |
PRJNA903916 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE218481_RAW.tar |
338.9 Mb |
(http)(custom) |
TAR (of BIGWIG, BROADPEAK, NARROWPEAK) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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