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Series GSE218481 Query DataSets for GSE218481
Status Public on Aug 06, 2023
Title ChIP-seq analysis of E2FA, E2FB, E2FC and RBR targets
Organism Arabidopsis thaliana
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary The goal of the experiment was to identify and compare at the genome-wide level the targets of E2FA, E2FB and E2FC, the three canonical E2Fs, and those of their binding partner RBR.
Overall design For each protein a transgenic line expressing a GFP fusion of the protein under the control of the native promoter was obtained. One replicate was produced for each experiment
Contributor(s) Chaouche RB, He X, Latrasse D, An J, Benhamed M, Raynaud C
Citation(s) 37666980
Submission date Nov 21, 2022
Last update date Sep 15, 2023
Contact name Xiaoning HE
Organization name universite-paris-saclay
Street address 630,Rue Noetzlin
City Gif Sur Yvette
ZIP/Postal code 91190
Country France
Platforms (1)
GPL19580 Illumina NextSeq 500 (Arabidopsis thaliana)
Samples (7)
GSM6745996 Arabidopsis ChIP_E2FA-GFP
GSM6745997 Arabidopsis ChIP_E2FB-GFP
GSM6745998 Arabidopsis ChIP_E2FC-GFP
BioProject PRJNA903916

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218481_RAW.tar 338.9 Mb (http)(custom) TAR (of BIGWIG, BROADPEAK, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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