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Series GSE218880 Query DataSets for GSE218880
Status Public on Nov 10, 2023
Title 5-methyl cytosine profile and chromatin profile of Anthoceros agrestis
Organism Anthoceros agrestis
Experiment type Methylation profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37823324
Submission date Nov 28, 2022
Last update date Apr 02, 2024
Contact name Tetsuya Hisanaga
E-mail(s) tetsuya.hisanaga@gmi.oeaw.ac.at
Phone +43 1 79044-9814
Organization name Gregor Mendel Institute
Lab Berger lab
Street address Dr.Bohr-gasse 3
City Vienna
State/province Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (2)
GPL32889 NextSeq 2000 (Anthoceros agrestis)
GPL32890 Illumina HiSeq 4000 (Anthoceros agrestis)
Samples (20)
GSM6758107 AagrOXF 4 week thalli, EMseq, rep1
GSM6758108 AagrOXF 4 week thalli, EMseq, rep2
GSM6758109 set1, AagrOXF 4week thalli, input, rep1
This SuperSeries is composed of the following SubSeries:
GSE218877 5-methyl cytosine profile of Anthoceros agrestis
GSE218878 Chromatin profile of Anthoceros agrestis
Relations
BioProject PRJNA906069

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE218880_RAW.tar 1.9 Gb (http)(custom) TAR (of BEDGRAPH, BROADPEAK, BW, TXT)
SRA Run SelectorHelp

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